Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 90.56 | 89.56 |
| KRH56556 | Soybean | nucleus, plastid | 76.11 | 80.59 |
| KRG93235 | Soybean | plastid | 75.0 | 80.36 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 46.67 | 77.78 |
| Bra039072.1-P | Field mustard | plastid | 54.44 | 74.81 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 70.56 | 74.71 |
| CDY20041 | Canola | plastid | 53.89 | 74.05 |
| CDY49773 | Canola | plastid | 53.89 | 73.48 |
| Bra025294.1-P | Field mustard | plastid | 53.33 | 72.73 |
| Bra033019.1-P | Field mustard | plastid | 53.33 | 72.73 |
| CDX83724 | Canola | plastid | 53.33 | 72.73 |
| CDY03987 | Canola | plastid | 53.33 | 72.73 |
| CDY13730 | Canola | plastid | 53.33 | 72.73 |
| PGSC0003DMT400032875 | Potato | plastid | 62.78 | 71.97 |
| Solyc02g086480.1.1 | Tomato | plastid | 58.89 | 71.14 |
| Solyc02g067800.2.1 | Tomato | plastid | 60.56 | 64.88 |
| PGSC0003DMT400017805 | Potato | plastid | 60.56 | 64.88 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 55.0 | 62.26 |
| KRH63606 | Soybean | plastid | 60.0 | 59.34 |
| KRH54338 | Soybean | plastid | 60.56 | 58.92 |
| KRH03242 | Soybean | nucleus, plastid | 60.56 | 57.67 |
| KRH57118 | Soybean | plastid | 60.0 | 54.82 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 41.11 | 48.05 |
| KRH14912 | Soybean | nucleus | 40.56 | 47.71 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 40.56 | 45.91 |
| KRG97685 | Soybean | mitochondrion, nucleus | 41.67 | 45.45 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 40.56 | 44.51 |
| Os01t0169400-01 | Rice | plastid | 60.0 | 43.03 |
| KRH20638 | Soybean | nucleus | 51.11 | 42.99 |
| KRH13283 | Soybean | nucleus | 50.56 | 42.92 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 40.0 | 42.35 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 40.0 | 42.35 |
| TraesCS3D01G093500.1 | Wheat | plastid | 59.44 | 41.63 |
| TraesCS3A01G093200.1 | Wheat | plastid | 59.44 | 41.63 |
| KRH13706 | Soybean | mitochondrion | 41.11 | 41.57 |
| TraesCS3B01G108500.1 | Wheat | plastid | 58.89 | 41.25 |
| KRH43747 | Soybean | mitochondrion | 40.56 | 41.24 |
| KRH30173 | Soybean | mitochondrion, nucleus | 38.89 | 40.7 |
| KRG98217 | Soybean | mitochondrion | 38.89 | 40.7 |
| Zm00001d039694_P001 | Maize | plastid | 58.89 | 40.61 |
| EES00235 | Sorghum | plastid | 59.44 | 39.93 |
| HORVU3Hr1G016690.1 | Barley | plastid | 61.11 | 39.71 |
| KRG88909 | Soybean | nucleus | 44.44 | 37.38 |
| KRH62409 | Soybean | nucleus | 42.78 | 36.32 |
| KRH10407 | Soybean | mitochondrion | 34.44 | 36.05 |
| KRH53127 | Soybean | nucleus | 39.44 | 34.8 |
| KRG89044 | Soybean | nucleus, plastid | 37.22 | 32.84 |
| KRH24932 | Soybean | nucleus, plastid | 36.67 | 32.67 |
| KRH64170 | Soybean | nucleus | 39.44 | 31.98 |
| KRH53776 | Soybean | nucleus | 39.44 | 31.98 |
| KRH22937 | Soybean | plastid | 34.44 | 31.31 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 42.22 | 30.04 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 40.0 | 28.92 |
| KRH57745 | Soybean | nucleus | 43.33 | 28.26 |
| KRH34918 | Soybean | plastid | 34.44 | 27.93 |
| KRH76950 | Soybean | nucleus | 46.67 | 27.63 |
| KRG91848 | Soybean | plastid | 33.89 | 27.48 |
| KRH28509 | Soybean | nucleus | 46.67 | 27.27 |
Protein Annotations
| EMBL:ACUP02009943 | EnsemblPlants:KRH07170 | EnsemblPlantsGene:GLYMA_16G071700 | EntrezGene:100800167 | InterPro:IPR004883 | InterPro:LOB |
| ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH07170 |
| ProteinID:KRH07170.1 | SEG:seg | UniParc:UPI0006ED58C8 | UniProt:A0A0R0FV53 | MapMan:15.5.24 | : |
Description
hypothetical protein
Coordinates
chr16:+:7205575..7207564
Molecular Weight (calculated)
20006.7 Da
IEP (calculated)
8.102
GRAVY (calculated)
-0.454
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYPPINSKR FLVVKIMASS SYSNSPCAAC KFLRRKCMPD CIFAPYFPPE EPQKFANVHK IFGASNVSKL LNEVQPHQRE DAVNSLAYEA EARIKDPVYG
101: CVGAISVLQR QVIRLQKELD ATSADLIRYT CNEMPTTTQD GRRIIGEGGG SSLGQSSGYY YPSPWNNDTL GDGYHRGDNI
101: CVGAISVLQR QVIRLQKELD ATSADLIRYT CNEMPTTTQD GRRIIGEGGG SSLGQSSGYY YPSPWNNDTL GDGYHRGDNI
001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
Arabidopsis Description
LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.