Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032875 | Potato | plastid | 79.87 | 75.8 |
| CDY49773 | Canola | plastid | 60.4 | 68.18 |
| Bra039072.1-P | Field mustard | plastid | 59.73 | 67.94 |
| Bra025294.1-P | Field mustard | plastid | 59.73 | 67.42 |
| CDX83724 | Canola | plastid | 59.73 | 67.42 |
| CDY13730 | Canola | plastid | 59.73 | 67.42 |
| CDY20041 | Canola | plastid | 59.06 | 67.18 |
| Bra033019.1-P | Field mustard | plastid | 57.72 | 65.15 |
| CDY03987 | Canola | plastid | 57.72 | 65.15 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 71.81 | 62.94 |
| Solyc02g067800.2.1 | Tomato | plastid | 70.47 | 62.5 |
| KRG93235 | Soybean | plastid | 69.13 | 61.31 |
| KRH56556 | Soybean | nucleus, plastid | 69.13 | 60.59 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 72.48 | 59.34 |
| KRH07170 | Soybean | plastid | 71.14 | 58.89 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 59.06 | 55.35 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 68.46 | 52.04 |
| Solyc03g063140.2.1 | Tomato | nucleus, plastid | 56.38 | 48.28 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.09 | 46.31 |
| Solyc02g069440.2.1 | Tomato | nucleus | 42.95 | 39.75 |
| Solyc06g050950.2.1 | Tomato | mitochondrion, nucleus, plastid | 43.62 | 38.01 |
| Os01t0169400-01 | Rice | plastid | 63.09 | 37.45 |
| Solyc11g045530.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 42.95 | 37.43 |
| Solyc06g082310.2.1 | Tomato | mitochondrion, nucleus, plastid | 43.62 | 37.36 |
| Solyc11g008830.1.1 | Tomato | plastid | 57.05 | 36.96 |
| TraesCS3D01G093500.1 | Wheat | plastid | 63.09 | 36.58 |
| TraesCS3B01G108500.1 | Wheat | plastid | 63.09 | 36.58 |
| TraesCS3A01G093200.1 | Wheat | plastid | 63.09 | 36.58 |
| Zm00001d039694_P001 | Maize | plastid | 63.09 | 36.02 |
| Solyc01g044520.1.1 | Tomato | nucleus | 40.94 | 35.67 |
| Solyc12g100150.1.1 | Tomato | mitochondrion | 39.6 | 35.12 |
| EES00235 | Sorghum | plastid | 63.09 | 35.07 |
| Solyc04g050010.1.1 | Tomato | cytosol | 38.26 | 34.55 |
| HORVU3Hr1G016690.1 | Barley | plastid | 63.09 | 33.94 |
| Solyc06g050430.2.1 | Tomato | nucleus | 44.97 | 30.88 |
| Solyc11g072470.1.1 | Tomato | plastid | 38.93 | 30.69 |
| Solyc06g005090.2.1 | Tomato | plastid | 40.27 | 30.3 |
| Solyc06g007390.2.1 | Tomato | nucleus | 47.65 | 29.83 |
| Solyc06g082430.1.1 | Tomato | cytosol, nucleus, plastid | 44.97 | 28.88 |
| Solyc05g048740.2.1 | Tomato | nucleus, plastid | 41.61 | 28.84 |
| Solyc02g065150.1.1 | Tomato | nucleus | 50.34 | 25.77 |
| Solyc02g090410.2.1 | Tomato | mitochondrion, plastid | 51.68 | 24.44 |
| Solyc06g075330.1.1 | Tomato | golgi, nucleus, plastid | 34.23 | 21.07 |
Protein Annotations
| EnsemblPlants:Solyc02g086480.1.1 | EnsemblPlantsGene:Solyc02g086480.1 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | UniParc:UPI000276797D | UniProt:K4BBF6 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:49157601..49158050
Molecular Weight (calculated)
16650.4 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.643
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSSSSSSN PPCAACKFLR RKCLPGCIFC PYFPPEDPQK FSNVHKIFGA SNVSKLLNEI EAHQREDAVN SLAYEAEARM KDPVYGCVGA ISVLQRQVIR
101: LQKELDATNA DLMRYANANY GTNNYGLYNN NNNTTWNNNP NPQPDDDIH
101: LQKELDATNA DLMRYANANY GTNNYGLYNN NNNTTWNNNP NPQPDDDIH
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.