Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069646 | Potato | plastid | 80.3 | 93.14 |
| KRH54338 | Soybean | plastid | 58.62 | 64.32 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 58.13 | 64.13 |
| KRH63606 | Soybean | plastid | 57.14 | 63.74 |
| Solyc02g086480.1.1 | Tomato | plastid | 46.31 | 63.09 |
| KRH03242 | Soybean | nucleus, plastid | 58.13 | 62.43 |
| CDY48125 | Canola | plastid | 52.22 | 60.23 |
| KRH57118 | Soybean | plastid | 58.13 | 59.9 |
| CDY16738 | Canola | plastid | 51.72 | 59.66 |
| Bra038606.1-P | Field mustard | plastid | 52.22 | 58.56 |
| CDY68853 | Canola | plastid | 52.22 | 58.56 |
| CDY69697 | Canola | plastid | 52.22 | 58.56 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 56.16 | 58.16 |
| Bra035860.1-P | Field mustard | plastid | 49.75 | 57.39 |
| AT5G63090.3 | Thale cress | plastid | 51.23 | 55.91 |
| Solyc02g067800.2.1 | Tomato | plastid | 45.81 | 55.36 |
| Solyc03g063140.2.1 | Tomato | nucleus, plastid | 42.86 | 50.0 |
| Solyc02g069440.2.1 | Tomato | nucleus | 32.51 | 40.99 |
| Os01t0169400-01 | Rice | plastid | 49.75 | 40.24 |
| Solyc06g082310.2.1 | Tomato | mitochondrion, nucleus, plastid | 33.99 | 39.66 |
| Solyc11g045530.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 33.0 | 39.18 |
| Solyc06g050950.2.1 | Tomato | mitochondrion, nucleus, plastid | 33.0 | 39.18 |
| Solyc11g008830.1.1 | Tomato | plastid | 43.84 | 38.7 |
| TraesCS3A01G093200.1 | Wheat | plastid | 48.77 | 38.52 |
| TraesCS3B01G108500.1 | Wheat | plastid | 48.28 | 38.13 |
| TraesCS3D01G093500.1 | Wheat | plastid | 48.28 | 38.13 |
| Zm00001d039694_P001 | Maize | plastid | 48.77 | 37.93 |
| EES00235 | Sorghum | plastid | 48.77 | 36.94 |
| Solyc12g100150.1.1 | Tomato | mitochondrion | 30.05 | 36.31 |
| HORVU3Hr1G016690.1 | Barley | plastid | 49.26 | 36.1 |
| Solyc04g050010.1.1 | Tomato | cytosol | 29.06 | 35.76 |
| Solyc01g044520.1.1 | Tomato | nucleus | 28.08 | 33.33 |
| Solyc06g005090.2.1 | Tomato | plastid | 30.54 | 31.31 |
| Solyc11g072470.1.1 | Tomato | plastid | 29.06 | 31.22 |
| Solyc06g050430.2.1 | Tomato | nucleus | 32.02 | 29.95 |
| Solyc06g082430.1.1 | Tomato | cytosol, nucleus, plastid | 32.51 | 28.45 |
| Solyc06g007390.2.1 | Tomato | nucleus | 32.51 | 27.73 |
| Solyc05g048740.2.1 | Tomato | nucleus, plastid | 29.06 | 27.44 |
| Solyc02g065150.1.1 | Tomato | nucleus | 38.42 | 26.8 |
| Solyc02g090410.2.1 | Tomato | mitochondrion, plastid | 37.44 | 24.13 |
| Solyc06g075330.1.1 | Tomato | golgi, nucleus, plastid | 25.12 | 21.07 |
Protein Annotations
| EnsemblPlants:Solyc06g071660.1.1 | EnsemblPlantsGene:Solyc06g071660.1 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF35 | PFAM:PF03195 | PFscan:PS50891 | SEG:seg | UniParc:UPI00027672CA | UniProt:K4C8N8 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:44130749..44133144
Molecular Weight (calculated)
22773.9 Da
IEP (calculated)
6.897
GRAVY (calculated)
-0.427
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGETSFSSLQ LGFFPFELAS IHQYQYYLYI YMASSSCYNS PCAACKFLRR KCLPGCIFAP HFPPEEPHKF ANVHKIFGAS NVTKLLNEVL PHQREDAVNT
101: LAYEAEARVR DPVYGCVSAI TFLQRQVERL EKELDSAKAD LMRYASNDMS QPLIGTHHHE GENIGSTLHN MAMSRRMGYD HHGGGSYFPW NDQNNSGGGG
201: GNI
101: LAYEAEARVR DPVYGCVSAI TFLQRQVERL EKELDSAKAD LMRYASNDMS QPLIGTHHHE GENIGSTLHN MAMSRRMGYD HHGGGSYFPW NDQNNSGGGG
201: GNI
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.