CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03242	Soybean	nucleus, plastid	92.89	96.83
KRH54338	Soybean	plastid	78.17	83.24
KRH63606	Soybean	plastid	76.65	82.97
VIT_17s0000g09010.t01	Wine grape	plastid	68.02	72.83
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	38.58	70.37
PGSC0003DMT400069646	Potato	plastid	59.9	67.43
PGSC0003DMT400046644	Potato	nucleus, plastid	64.47	66.49
KRG93235	Soybean	plastid	55.33	64.88
CDY16738	Canola	plastid	57.87	64.77
CDY48125	Canola	plastid	57.87	64.77
KRH56556	Soybean	nucleus, plastid	55.33	64.12
Solyc03g112430.1.1	Tomato	nucleus, plastid	63.45	63.78
Bra038606.1-P	Field mustard	plastid	58.38	63.54
CDY68853	Canola	plastid	58.38	63.54
CDY69697	Canola	plastid	58.38	63.54
Bra035860.1-P	Field mustard	plastid	55.84	62.5
AT5G63090.3	Thale cress	plastid	56.85	60.22
KRH07170	Soybean	plastid	54.82	60.0
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	54.31	58.79
Solyc06g071660.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	59.9	58.13
KRH73255	Soybean	mitochondrion, nucleus, plastid	38.58	49.35
KRH14912	Soybean	nucleus	38.07	49.02
KRH50484	Soybean	cytosol, nucleus, plastid	39.09	48.43
KRG97685	Soybean	mitochondrion, nucleus	40.1	47.88
KRG89441	Soybean	cytosol, nucleus, plastid	39.09	46.95
KRH13283	Soybean	nucleus	49.24	45.75
KRH20638	Soybean	nucleus	48.73	44.86
Os01t0169400-01	Rice	plastid	56.35	44.22
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	38.07	44.12
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	38.07	44.12
Zm00001d039694_P001	Maize	plastid	57.36	43.3
KRH13706	Soybean	mitochondrion	39.09	43.26
KRG98217	Soybean	mitochondrion	37.56	43.02
EES00235	Sorghum	plastid	57.87	42.54
KRH30173	Soybean	mitochondrion, nucleus	37.06	42.44
KRH43747	Soybean	mitochondrion	38.07	42.37
TraesCS3D01G093500.1	Wheat	plastid	54.31	41.63
TraesCS3B01G108500.1	Wheat	plastid	54.31	41.63
TraesCS3A01G093200.1	Wheat	plastid	54.31	41.63
KRG88909	Soybean	nucleus	44.16	40.65
HORVU3Hr1G016690.1	Barley	plastid	54.82	38.99
KRH62409	Soybean	nucleus	41.62	38.68
KRH53127	Soybean	nucleus	38.58	37.25
KRH10407	Soybean	mitochondrion	31.47	36.05
KRH53776	Soybean	nucleus	38.07	33.78
KRH64170	Soybean	nucleus	37.56	33.33
KRG89044	Soybean	nucleus, plastid	34.01	32.84
KRH24932	Soybean	nucleus, plastid	33.5	32.67
KRH22937	Soybean	plastid	31.98	31.82
KRH57745	Soybean	nucleus	42.13	30.07
KRH17149	Soybean	cytosol, mitochondrion, nucleus	37.56	29.72
KRH72805	Soybean	cytosol, mitochondrion, nucleus	38.07	29.64
KRH34918	Soybean	plastid	32.99	29.28
KRG91848	Soybean	plastid	32.49	28.83
KRH76950	Soybean	nucleus	44.16	28.62
KRH28509	Soybean	nucleus	43.65	27.92

Protein Annotations

EMBL:ACUP02002812	EnsemblPlants:KRH57118	EnsemblPlantsGene:GLYMA_05G040500	EntrezGene:100803667	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF12	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH57118
ProteinID:KRH57118.1	UniParc:UPI000233A113	UniProt:A0A0R0JQP9	MapMan:15.5.24	:	:

Description

hypothetical protein

Coordinates

chr5:-:3626122..3627052

Molecular Weight (calculated)

21592.5 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.256

Length

197 amino acids

Sequence
(BLAST)

001: MPIFLVQGKM ASSSSYNSPC AACKFLRRKC MPGCIFAPYF PPEEPQKFAN VHKIFGASNV TKLLNELLPH QREDAVNSLA YEAEARVRDP VYGCVGAISF
101: LQRQVQRLQK ELDAANADLL RYSYTDITPT SLSVPPGLAS FHQVPQRQFS ARFGNEASGF YRHQSAATAF SFPYALPWTD TSSEDISEGA GAGGGNL

Best Arabidopsis Sequence Match ( AT5G63090.1 )
(BLAST)

001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM

Arabidopsis Description

LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.