CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
nucleus 3
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22937	Soybean	plastid	95.93	83.33
KRG89044	Soybean	nucleus, plastid	86.05	72.55
KRH24932	Soybean	nucleus, plastid	84.88	72.28
PGSC0003DMT400019410	Potato	plastid	71.51	62.12
GSMUA_Achr7P15500_001	Banana	nucleus	68.6	60.2
VIT_13s0019g03700.t01	Wine grape	plastid	67.44	58.88
AT1G07900.1	Thale cress	plastid	64.53	58.42
KRG91848	Soybean	plastid	72.67	56.31
KRH34918	Soybean	plastid	72.09	55.86
Bra018675.1-P	Field mustard	plastid	66.28	55.34
CDY22713	Canola	plastid	61.05	54.97
CDY06285	Canola	nucleus, plastid	59.88	54.21
GSMUA_Achr8P09700_001	Banana	cytosol	63.95	53.92
Bra031599.1-P	Field mustard	nucleus, plastid	62.79	52.17
CDY15755	Canola	plastid	65.12	51.61
AT2G28500.1	Thale cress	plastid	69.19	51.29
CDX77182	Canola	plastid	64.53	51.15
CDY62454	Canola	plastid	64.53	51.15
CDY04570	Canola	plastid	64.53	50.92
Bra035698.1-P	Field mustard	plastid	67.44	50.66
CDY31207	Canola	plastid	62.79	50.0
Bra011942.1-P	Field mustard	plastid	67.44	49.79
GSMUA_Achr4P16790_001	Banana	plastid	54.65	49.47
CDX83290	Canola	plastid	66.28	49.35
Bra000491.1-P	Field mustard	plastid	66.28	49.35
CDX93609	Canola	nucleus	63.37	48.44
KRH50484	Soybean	cytosol, nucleus, plastid	44.77	48.43
TraesCS1A01G062200.1	Wheat	cytosol, plastid	57.56	48.06
KRH43747	Soybean	mitochondrion	48.84	47.46
KRG89441	Soybean	cytosol, nucleus, plastid	44.77	46.95
EES18939	Sorghum	plastid	59.3	46.58
CDX95115	Canola	plastid	61.63	46.49
KRH14912	Soybean	nucleus	41.28	46.41
GSMUA_Achr10P...	Banana	plastid	67.44	46.4
Solyc06g075330.1.1	Tomato	golgi, nucleus, plastid	65.12	46.28
KRH73255	Soybean	mitochondrion, nucleus, plastid	41.28	46.1
KRH13706	Soybean	mitochondrion	47.67	46.07
KRG97685	Soybean	mitochondrion, nucleus	44.19	46.06
TraesCS2D01G008400.1	Wheat	plastid	57.56	46.05
TraesCS1B01G080600.1	Wheat	cytosol, plastid	57.56	46.05
HORVU1Hr1G012720.1	Barley	cytosol, plastid	57.56	46.05
Zm00001d035498_P001	Maize	plastid	58.72	45.7
EER92422	Sorghum	plastid	62.21	45.53
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	44.77	45.29
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	44.77	45.29
Zm00001d010978_P001	Maize	plastid	55.23	44.81
KRG98217	Soybean	mitochondrion	44.77	44.77
Zm00001d028721_P001	Maize	plastid	61.05	44.68
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	27.91	44.44
TraesCS4D01G197400.1	Wheat	plastid	57.56	44.39
TraesCS4B01G197100.1	Wheat	plastid	57.56	44.39
Zm00001d047752_P001	Maize	plastid	61.63	44.35
HORVU4Hr1G056890.2	Barley	plastid	57.56	44.2
KRH30173	Soybean	mitochondrion, nucleus	44.19	44.19
TraesCS4A01G107300.1	Wheat	plastid	56.4	43.5
Os03t0287400-01	Rice	plastid	59.88	43.1
GSMUA_Achr3P17800_001	Banana	mitochondrion, plastid	56.4	41.45
KRH56556	Soybean	nucleus, plastid	37.21	37.65
KRG93235	Soybean	plastid	36.63	37.5
KRH63606	Soybean	plastid	37.21	35.16
KRH07170	Soybean	plastid	36.05	34.44
KRH54338	Soybean	plastid	36.63	34.05
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	35.47	33.52
KRH03242	Soybean	nucleus, plastid	36.05	32.8
KRH57118	Soybean	plastid	36.05	31.47
KRH64170	Soybean	nucleus	38.95	30.18
KRH53776	Soybean	nucleus	38.95	30.18
KRH20638	Soybean	nucleus	36.63	29.44
KRH13283	Soybean	nucleus	36.05	29.25
KRH62409	Soybean	nucleus	36.05	29.25
KRH53127	Soybean	nucleus	33.14	27.94
KRH17149	Soybean	cytosol, mitochondrion, nucleus	38.95	26.91
KRH72805	Soybean	cytosol, mitochondrion, nucleus	39.53	26.88
KRG88909	Soybean	nucleus	33.14	26.64
KRH57745	Soybean	nucleus	36.05	22.46
KRH28509	Soybean	nucleus	39.53	22.08
KRH76950	Soybean	nucleus	38.95	22.04

Protein Annotations

EMBL:ACUP02009142	EnsemblPlants:KRH10407	EnsemblPlantsGene:GLYMA_15G045200	EntrezGene:100798401	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF6	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH10407
ProteinID:KRH10407.1	SEG:seg	UniParc:UPI00023D2B94	UniProt:I1MDM7	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr15:+:3620311..3622470

Molecular Weight (calculated)

19196.9 Da

IEP (calculated)

5.747

GRAVY (calculated)

-0.249

Length

172 amino acids

Sequence
(BLAST)

001: MSPCAACKIL RRRCAEKCVL APYFPLTEPS KFTTAHRVFG ASNIIKFLQE LPESQRADAV ASMVYEAGAR IRDPVYGCAG AICQLQKQVN ELQAQLAKAQ
101: AEVVNMQLQQ ANLVALICME MAQTQTPQEY SPQQSVDNFI SSTSHSSGYQ NNLNFFEENT NNLNSLWEPL WT

Best Arabidopsis Sequence Match ( AT2G28500.1 )
(BLAST)

001: MLKMEINGGV ATPTASAVAK VTETTTPVNS PSPTSSPPPP PSPQQPPQPP VVLSPCAACK ILRRRCADKC VLAPYFPPTD PAKFTIAHRV FGASNIIKFL
101: QELPESQRTD AVNSMVYEAG ARMRDPVYGC AGAIYHLQRQ VSELQAQLAK TQVELVGMQL QRSSLLELIY NMEQTKLSVQ EQGQQKMSFE SSFESGDEFI
201: SSPDEESNDL GFLEDNNNNN NSSMSWWDPL WT

Arabidopsis Description

LBD11LOB domain-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK08]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.