CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54338	Soybean	plastid	93.96	92.43
KRH03242	Soybean	nucleus, plastid	82.97	79.89
KRH57118	Soybean	plastid	82.97	76.65
VIT_17s0000g09010.t01	Wine grape	plastid	73.63	72.83
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	41.21	69.44
PGSC0003DMT400046644	Potato	nucleus, plastid	71.43	68.06
Solyc03g112430.1.1	Tomato	nucleus, plastid	70.88	65.82
PGSC0003DMT400069646	Potato	plastid	63.19	65.71
KRG93235	Soybean	plastid	58.24	63.1
KRH56556	Soybean	nucleus, plastid	58.24	62.35
CDY16738	Canola	plastid	59.89	61.93
CDY48125	Canola	plastid	59.89	61.93
CDY68853	Canola	plastid	60.44	60.77
CDY69697	Canola	plastid	60.44	60.77
Bra038606.1-P	Field mustard	plastid	60.44	60.77
KRH07170	Soybean	plastid	59.34	60.0
Bra035860.1-P	Field mustard	plastid	57.69	59.66
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	58.79	58.79
AT5G63090.3	Thale cress	plastid	58.79	57.53
Solyc06g071660.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	63.74	57.14
KRH73255	Soybean	mitochondrion, nucleus, plastid	42.31	50.0
KRH50484	Soybean	cytosol, nucleus, plastid	42.86	49.06
KRH14912	Soybean	nucleus	41.21	49.02
KRG97685	Soybean	mitochondrion, nucleus	43.41	47.88
KRG89441	Soybean	cytosol, nucleus, plastid	42.86	47.56
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	41.76	44.71
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	41.76	44.71
Os01t0169400-01	Rice	plastid	60.99	44.22
KRH13283	Soybean	nucleus	50.55	43.4
KRH13706	Soybean	mitochondrion	42.31	43.26
KRG98217	Soybean	mitochondrion	40.66	43.02
KRH20638	Soybean	nucleus	50.0	42.52
KRH30173	Soybean	mitochondrion, nucleus	40.11	42.44
KRH43747	Soybean	mitochondrion	41.21	42.37
Zm00001d039694_P001	Maize	plastid	59.89	41.76
TraesCS3D01G093500.1	Wheat	plastid	58.79	41.63
TraesCS3B01G108500.1	Wheat	plastid	58.79	41.63
TraesCS3A01G093200.1	Wheat	plastid	58.79	41.63
EES00235	Sorghum	plastid	59.89	40.67
KRG88909	Soybean	nucleus	47.8	40.65
HORVU3Hr1G016690.1	Barley	plastid	59.34	38.99
KRH62409	Soybean	nucleus	43.41	37.26
KRH10407	Soybean	mitochondrion	35.16	37.21
KRH53127	Soybean	nucleus	39.01	34.8
KRG89044	Soybean	nucleus, plastid	37.36	33.33
KRH53776	Soybean	nucleus	40.66	33.33
KRH64170	Soybean	nucleus	40.11	32.88
KRH24932	Soybean	nucleus, plastid	36.26	32.67
KRH22937	Soybean	plastid	35.16	32.32
KRH57745	Soybean	nucleus	45.05	29.71
KRH34918	Soybean	plastid	35.71	29.28
KRH17149	Soybean	cytosol, mitochondrion, nucleus	39.56	28.92
KRG91848	Soybean	plastid	35.16	28.83
KRH72805	Soybean	cytosol, mitochondrion, nucleus	39.01	28.06
KRH76950	Soybean	nucleus	46.15	27.63
KRH28509	Soybean	nucleus	46.15	27.27

Protein Annotations

EMBL:ACUP02002703	EnsemblPlants:KRH63606	EnsemblPlantsGene:GLYMA_04G186900	EntrezGene:100800614	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF12	PFAM:PF03195	PFscan:PS50891	ProteinID:AFK81067.1
ProteinID:KRH63605.1	ProteinID:KRH63606	ProteinID:KRH63606.1	ProteinID:KRH63607.1	SEG:seg	UniParc:UPI000233A972
UniProt:I1JXA7	MapMan:15.5.24	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:45715041..45717857

Molecular Weight (calculated)

19964.3 Da

IEP (calculated)

5.767

GRAVY (calculated)

-0.457

Length

182 amino acids

Sequence
(BLAST)

001: MASSSSYNSP CAACKFLRRK CLPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNELLP HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVQKLQ
101: KELDSANADL LRFACNDMPP PSLSVPPQIP QRSFSAGFGN NNESASGGEF YRPSPTTTYS YPYSLPWTDT SSEDINDGGG NL

Best Arabidopsis Sequence Match ( AT3G27650.1 )
(BLAST)

001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG

Arabidopsis Description

LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.