CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34918	Soybean	plastid	97.75	97.75
KRH10407	Soybean	mitochondrion	56.31	72.67
KRH24932	Soybean	nucleus, plastid	63.06	69.31
VIT_06s0004g03350.t01	Wine grape	plastid	63.51	69.12
KRG89044	Soybean	nucleus, plastid	63.51	69.12
VIT_06s0004g03330.t01	Wine grape	nucleus, plastid	61.26	67.33
KRH22937	Soybean	plastid	59.46	66.67
GSMUA_Achr7P15500_001	Banana	nucleus	55.86	63.27
AT1G07900.1	Thale cress	plastid	54.05	63.16
CDY22713	Canola	plastid	50.9	59.16
CDY06285	Canola	nucleus, plastid	49.55	57.89
Bra018675.1-P	Field mustard	plastid	53.6	57.77
GSMUA_Achr8P09700_001	Banana	cytosol	52.25	56.86
CDY15755	Canola	plastid	54.95	56.22
CDY62454	Canola	plastid	54.5	55.76
CDY04570	Canola	plastid	54.5	55.5
CDX77182	Canola	plastid	54.05	55.3
GSMUA_Achr4P16790_001	Banana	plastid	47.3	55.26
AT2G28500.1	Thale cress	plastid	56.76	54.31
CDY31207	Canola	plastid	52.7	54.17
Bra031599.1-P	Field mustard	nucleus, plastid	50.45	54.11
Bra035698.1-P	Field mustard	plastid	54.95	53.28
Bra011942.1-P	Field mustard	plastid	55.41	52.79
TraesCS1A01G062200.1	Wheat	cytosol, plastid	48.65	52.43
Bra000491.1-P	Field mustard	plastid	54.5	52.38
CDX83290	Canola	plastid	54.5	52.38
CDX93609	Canola	nucleus	52.7	52.0
KRH14912	Soybean	nucleus	34.68	50.33
TraesCS2D01G008400.1	Wheat	plastid	48.65	50.23
TraesCS1B01G080600.1	Wheat	cytosol, plastid	48.65	50.23
HORVU1Hr1G012720.1	Barley	cytosol, plastid	48.65	50.23
EER92422	Sorghum	plastid	53.15	50.21
GSMUA_Achr10P...	Banana	plastid	56.31	50.0
KRH73255	Soybean	mitochondrion, nucleus, plastid	34.68	50.0
CDX95115	Canola	plastid	51.35	50.0
Zm00001d028721_P001	Maize	plastid	52.7	49.79
Zm00001d047752_P001	Maize	plastid	53.15	49.37
EES18939	Sorghum	plastid	48.65	49.32
KRG97685	Soybean	mitochondrion, nucleus	36.49	49.09
KRH50484	Soybean	cytosol, nucleus, plastid	35.14	49.06
Zm00001d035498_P001	Maize	plastid	48.65	48.87
TraesCS4D01G197400.1	Wheat	plastid	48.65	48.43
TraesCS4B01G197100.1	Wheat	plastid	48.65	48.43
KRG98217	Soybean	mitochondrion	37.39	48.26
Os03t0287400-01	Rice	plastid	51.8	48.12
KRH43747	Soybean	mitochondrion	38.29	48.02
HORVU4Hr1G056890.2	Barley	plastid	48.2	47.77
KRH30173	Soybean	mitochondrion, nucleus	36.94	47.67
Zm00001d010978_P001	Maize	plastid	45.5	47.64
KRG89441	Soybean	cytosol, nucleus, plastid	35.14	47.56
TraesCS4A01G107300.1	Wheat	plastid	47.75	47.53
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	35.59	46.47
KRH13706	Soybean	mitochondrion	36.94	46.07
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	35.14	45.88
GSMUA_Achr3P17800_001	Banana	mitochondrion, plastid	48.2	45.73
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	21.62	44.44
KRG93235	Soybean	plastid	28.38	37.5
KRH56556	Soybean	nucleus, plastid	28.38	37.06
KRH63606	Soybean	plastid	28.83	35.16
KRH54338	Soybean	plastid	28.38	34.05
KRH07170	Soybean	plastid	27.48	33.89
KRH03242	Soybean	nucleus, plastid	28.83	33.86
KRH57118	Soybean	plastid	28.83	32.49
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	26.58	32.42
KRH53776	Soybean	nucleus	31.08	31.08
KRH64170	Soybean	nucleus	31.08	31.08
KRH20638	Soybean	nucleus	28.83	29.91
KRH17149	Soybean	cytosol, mitochondrion, nucleus	33.33	29.72
KRH13283	Soybean	nucleus	28.38	29.72
KRH62409	Soybean	nucleus	27.48	28.77
KRH72805	Soybean	cytosol, mitochondrion, nucleus	32.43	28.46
KRH53127	Soybean	nucleus	25.68	27.94
KRG88909	Soybean	nucleus	25.68	26.64
KRH57745	Soybean	nucleus	27.03	21.74
KRH28509	Soybean	nucleus	28.38	20.45
KRH76950	Soybean	nucleus	27.93	20.39

Protein Annotations

EMBL:ACUP02012710	EnsemblPlants:KRG91848	EnsemblPlantsGene:GLYMA_20G177600	EntrezGene:100806667	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF14	PFAM:PF03195	PFscan:PS50891	ProteinID:KRG91848
ProteinID:KRG91848.1	SEG:seg	UniParc:UPI000233DA12	UniProt:I1NHD1	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr20:+:41502442..41504116

Molecular Weight (calculated)

24063.9 Da

IEP (calculated)

6.867

GRAVY (calculated)

-0.218

Length

222 amino acids

Sequence
(BLAST)

001: MEYKVKTTTS TPSPPIPIHL PTMLSNSPPS SSSSPPSQSP TPFPSPSQGS PSAAPPSPPP PPPPVVVSPC AACKILRRRC VEKCVLAPYF PPTDPLKFTI
101: AHRVFGASNI IKFLQELPES QRADAVSSMV YEANARIRDP VYGCAGAICQ LQKQVSELQA QLAKAQAEVV NMQCQQANLV ALICMEMSQS QEQHVLQPQP
201: HVDMSCFIED NSFGTAWEPL WT

Best Arabidopsis Sequence Match ( AT1G07900.1 )
(BLAST)

001: MESKSDASVA TTPIISSSSS PPPSLSPRVV LSPCAACKIL RRRCAERCVL APYFPPTDPA KFTIAHRVFG ASNIIKFLQE LPESQRTDAV NSMVYEAEAR
101: IRDPVYGCAG AIYHLQRQVS ELQAQLAKAQ VEMVNMQFQR SNLLELIYNM DQQQKQEQDN MSFESNDLGF LEDKSNTNSS MLWWDPLWTC

Arabidopsis Description

LBD1LBD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WM56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.