Skip to main content
crop-pal logo
Wine grape
Search for another protein from :
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • nucleus 3
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
PTS1:peroxisome
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g03330.t01 Wine grape nucleus, plastid 81.86 82.67
GSMUA_Achr7P15500_001 Banana nucleus 61.76 64.29
KRG91848 Soybean plastid 69.12 63.51
VIT_13s0019g03700.t01 Wine grape plastid 61.27 63.45
AT1G07900.1 Thale cress plastid 58.82 63.16
KRH34918 Soybean plastid 68.63 63.06
VIT_13s0019g03760.t01 Wine grape plastid 42.16 62.77
GSMUA_Achr8P09700_001 Banana cytosol 59.8 59.8
CDY06285 Canola nucleus, plastid 53.92 57.89
CDY22713 Canola plastid 53.92 57.59
VIT_13s0019g03720.t01 Wine grape nucleus, plastid 45.1 56.79
GSMUA_Achr4P16790_001 Banana plastid 52.45 56.32
Bra018675.1-P Field mustard plastid 56.86 56.31
CDX77182 Canola plastid 59.31 55.76
CDY15755 Canola plastid 58.82 55.3
CDY62454 Canola plastid 58.82 55.3
VIT_13s0019g03710.t01 Wine grape nucleus, plastid 44.61 55.15
Bra031599.1-P Field mustard nucleus, plastid 55.88 55.07
CDY31207 Canola plastid 57.35 54.17
CDY04570 Canola plastid 57.84 54.13
VIT_13s0019g03750.t01 Wine grape plastid 46.08 54.02
AT2G28500.1 Thale cress plastid 61.27 53.88
VIT_13s0019g03780.t01 Wine grape plastid 45.59 53.76
Bra035698.1-P Field mustard plastid 60.29 53.71
TraesCS1A01G062200.1 Wheat cytosol, plastid 53.92 53.4
CDX83290 Canola plastid 59.8 52.81
Bra000491.1-P Field mustard plastid 59.8 52.81
Bra011942.1-P Field mustard plastid 59.8 52.36
HORVU1Hr1G012720.1 Barley cytosol, plastid 54.41 51.63
GSMUA_Achr10P... Banana plastid 63.24 51.6
TraesCS4B01G197100.1 Wheat plastid 56.37 51.57
VIT_06s0004g07200.t01 Wine grape mitochondrion, nucleus 41.18 51.53
EER92422 Sorghum plastid 59.31 51.49
TraesCS1B01G080600.1 Wheat cytosol, plastid 53.92 51.16
TraesCS2D01G008400.1 Wheat plastid 53.92 51.16
TraesCS4D01G197400.1 Wheat plastid 55.88 51.12
HORVU4Hr1G056890.2 Barley plastid 55.88 50.89
EES18939 Sorghum plastid 54.41 50.68
Zm00001d035498_P001 Maize plastid 54.9 50.68
Zm00001d028721_P001 Maize plastid 58.33 50.64
TraesCS4A01G107300.1 Wheat plastid 54.9 50.22
CDX93609 Canola nucleus 55.39 50.22
Zm00001d010978_P001 Maize plastid 51.96 50.0
CDX95115 Canola plastid 55.39 49.56
VIT_19s0027g01120.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 40.69 48.82
Zm00001d047752_P001 Maize plastid 56.86 48.54
Os03t0287400-01 Rice plastid 56.37 48.12
VIT_00s0125g00290.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 40.2 46.86
VIT_13s0067g01880.t01 Wine grape mitochondrion 38.73 46.2
GSMUA_Achr3P17800_001 Banana mitochondrion, plastid 51.96 45.3
VIT_14s0066g00680.t01 Wine grape nucleus, plastid 32.84 39.41
VIT_17s0000g09010.t01 Wine grape plastid 32.84 36.41
VIT_13s0067g02380.t01 Wine grape nucleus 36.76 33.48
VIT_00s0340g00090.t01 Wine grape nucleus 33.33 31.48
VIT_06s0004g07790.t01 Wine grape cytosol 34.8 31.0
VIT_00s1247g00010.t01 Wine grape nucleus 32.35 27.39
VIT_07s0197g00030.t01 Wine grape nucleus 29.9 24.9
VIT_07s0197g00020.t01 Wine grape nucleus 33.33 23.29
VIT_16s0022g02050.t01 Wine grape cytosol, mitochondrion, nucleus 32.35 23.0
VIT_07s0197g00040.t01 Wine grape cytosol, nucleus, plastid 32.84 22.41
Protein Annotations
ArrayExpress:VIT_06s0004g03350EMBL:AM448162EMBL:FN594951EnsemblPlants:VIT_06s0004g03350.t01EnsemblPlantsGene:VIT_06s0004g03350EntrezGene:104879565
InterPro:IPR004883InterPro:LOBncoils:CoilPANTHER:PTHR31301PANTHER:PTHR31301:SF6PFAM:PF03195
PFscan:PS50891ProteinID:CAN69741ProteinID:CAN69741.1ProteinID:CBI16262ProteinID:CBI16262.3RefSeq:XP_010651120.1
SEG:segUniParc:UPI00015C7CECUniProt:D7SKT4MapMan:15.5.24::
Description
No Description!
Coordinates
chr6:-:4201646..4202347
Molecular Weight (calculated)
21946.1 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.153
Length
204 amino acids
Sequence
(BLAST)
001: MACSDPTSAP NPTTTSPSSP HSLSPPSSST PPPPTVVLSP CAACKILRRR CAEKCVLAPY FPPTDPAKFT TAHRVFGASN IIKFLQELPE YQRADAVSSM
101: VYEAQARIRD PVYGCTGAIC QLQKQVSELQ AQLAKAQAEL VNMQCQQANL IAIICMEMSG SPQPSSFQQS LDSFISPPSY QSGSCFLDDN ITGAAWEPLW
201: TSSL
Best Arabidopsis Sequence Match ( AT2G28500.1 )
(BLAST)
001: MLKMEINGGV ATPTASAVAK VTETTTPVNS PSPTSSPPPP PSPQQPPQPP VVLSPCAACK ILRRRCADKC VLAPYFPPTD PAKFTIAHRV FGASNIIKFL
101: QELPESQRTD AVNSMVYEAG ARMRDPVYGC AGAIYHLQRQ VSELQAQLAK TQVELVGMQL QRSSLLELIY NMEQTKLSVQ EQGQQKMSFE SSFESGDEFI
201: SSPDEESNDL GFLEDNNNNN NSSMSWWDPL WT
Arabidopsis Description
LBD11LOB domain-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK08]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.