Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035698.1-P | Field mustard | plastid | 87.93 | 89.08 |
| CDY62454 | Canola | plastid | 82.76 | 88.48 |
| CDY15755 | Canola | plastid | 82.76 | 88.48 |
| CDX77182 | Canola | plastid | 82.76 | 88.48 |
| Bra011942.1-P | Field mustard | plastid | 87.5 | 87.12 |
| CDY04570 | Canola | plastid | 80.6 | 85.78 |
| CDX83290 | Canola | plastid | 83.19 | 83.55 |
| Bra000491.1-P | Field mustard | plastid | 83.19 | 83.55 |
| AT1G07900.1 | Thale cress | plastid | 68.1 | 83.16 |
| CDY31207 | Canola | plastid | 76.29 | 81.94 |
| KRH10407 | Soybean | mitochondrion | 51.29 | 69.19 |
| KRH22937 | Soybean | plastid | 55.17 | 64.65 |
| KRG89044 | Soybean | nucleus, plastid | 56.03 | 63.73 |
| Solyc11g072470.1.1 | Tomato | plastid | 51.29 | 62.96 |
| VIT_06s0004g03330.t01 | Wine grape | nucleus, plastid | 54.74 | 62.87 |
| KRH24932 | Soybean | nucleus, plastid | 54.74 | 62.87 |
| Solyc04g050010.1.1 | Tomato | cytosol | 44.4 | 62.42 |
| VIT_06s0004g03350.t01 | Wine grape | plastid | 53.88 | 61.27 |
| Solyc06g005090.2.1 | Tomato | plastid | 51.72 | 60.61 |
| VIT_13s0019g03700.t01 | Wine grape | plastid | 50.86 | 59.9 |
| PGSC0003DMT400019410 | Potato | plastid | 50.43 | 59.09 |
| PGSC0003DMT400010597 | Potato | cytosol, nucleus, plastid | 43.97 | 58.96 |
| PGSC0003DMT400065346 | Potato | plastid | 51.72 | 57.42 |
| KRH34918 | Soybean | plastid | 54.31 | 56.76 |
| KRG91848 | Soybean | plastid | 54.31 | 56.76 |
| GSMUA_Achr6P33070_001 | Banana | plastid | 47.84 | 56.63 |
| Solyc05g048740.2.1 | Tomato | nucleus, plastid | 51.72 | 55.81 |
| PGSC0003DMT400065297 | Potato | plastid | 49.14 | 52.78 |
| GSMUA_Achr9P04330_001 | Banana | plastid | 39.22 | 51.12 |
| TraesCS1A01G062200.1 | Wheat | cytosol, plastid | 44.4 | 50.0 |
| Zm00001d035498_P001 | Maize | plastid | 45.69 | 47.96 |
| HORVU1Hr1G012720.1 | Barley | cytosol, plastid | 44.4 | 47.91 |
| TraesCS2D01G008400.1 | Wheat | plastid | 44.4 | 47.91 |
| TraesCS1B01G080600.1 | Wheat | cytosol, plastid | 44.4 | 47.91 |
| Zm00001d010978_P001 | Maize | plastid | 42.67 | 46.7 |
| EES18939 | Sorghum | plastid | 43.97 | 46.58 |
| Zm00001d047752_P001 | Maize | plastid | 47.41 | 46.03 |
| EER92422 | Sorghum | plastid | 46.55 | 45.96 |
| AT1G31320.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 33.62 | 45.35 |
| Zm00001d028721_P001 | Maize | plastid | 45.69 | 45.11 |
| HORVU4Hr1G056890.2 | Barley | plastid | 43.53 | 45.09 |
| TraesCS4B01G197100.1 | Wheat | plastid | 43.1 | 44.84 |
| TraesCS4D01G197400.1 | Wheat | plastid | 43.1 | 44.84 |
| TraesCS4A01G107300.1 | Wheat | plastid | 42.67 | 44.39 |
| Os03t0287400-01 | Rice | plastid | 45.69 | 44.35 |
| Solyc06g075330.1.1 | Tomato | golgi, nucleus, plastid | 43.97 | 42.15 |
| AT1G16530.1 | Thale cress | mitochondrion | 29.74 | 41.82 |
| AT2G30130.1 | Thale cress | mitochondrion, nucleus | 34.48 | 41.45 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 27.59 | 40.25 |
| AT5G63090.3 | Thale cress | plastid | 28.02 | 34.95 |
| AT1G65620.1 | Thale cress | plastid | 28.02 | 32.66 |
| AT2G40470.1 | Thale cress | cytosol, nucleus, plastid | 30.17 | 31.25 |
| AT2G30340.2 | Thale cress | nucleus | 30.17 | 26.02 |
| AT2G23660.2 | Thale cress | mitochondrion, nucleus | 30.17 | 22.51 |
| AT5G66870.1 | Thale cress | nucleus | 28.45 | 21.09 |
Protein Annotations
| MapMan:15.5.24 | EntrezGene:817398 | ProteinID:AAD21485.1 | EMBL:AB473840 | ProteinID:AEC08131.1 | ArrayExpress:AT2G28500 |
| EnsemblPlantsGene:AT2G28500 | RefSeq:AT2G28500 | TAIR:AT2G28500 | RefSeq:AT2G28500-TAIR-G | EnsemblPlants:AT2G28500.1 | TAIR:AT2G28500.1 |
| EMBL:CK117671 | ncoils:Coil | GO:GO:0008150 | InterPro:IPR004883 | Symbol:LBD11 | InterPro:LOB |
| RefSeq:NP_180417.2 | PFAM:PF03195 | PFscan:PS50891 | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF6 | UniProt:Q9SK08 |
| UniParc:UPI00005DC2C8 | SEG:seg | : | : | : | : |
Description
LBD11LOB domain-containing protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK08]
Coordinates
chr2:-:12186274..12188293
Molecular Weight (calculated)
25536.2 Da
IEP (calculated)
4.642
GRAVY (calculated)
-0.428
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKMEINGGV ATPTASAVAK VTETTTPVNS PSPTSSPPPP PSPQQPPQPP VVLSPCAACK ILRRRCADKC VLAPYFPPTD PAKFTIAHRV FGASNIIKFL
101: QELPESQRTD AVNSMVYEAG ARMRDPVYGC AGAIYHLQRQ VSELQAQLAK TQVELVGMQL QRSSLLELIY NMEQTKLSVQ EQGQQKMSFE SSFESGDEFI
201: SSPDEESNDL GFLEDNNNNN NSSMSWWDPL WT
101: QELPESQRTD AVNSMVYEAG ARMRDPVYGC AGAIYHLQRQ VSELQAQLAK TQVELVGMQL QRSSLLELIY NMEQTKLSVQ EQGQQKMSFE SSFESGDEFI
201: SSPDEESNDL GFLEDNNNNN NSSMSWWDPL WT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.