CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 5
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89044	Soybean	nucleus, plastid	93.07	92.16
KRH10407	Soybean	mitochondrion	72.28	84.88
KRH22937	Soybean	plastid	78.22	79.8
PGSC0003DMT400019410	Potato	plastid	63.86	65.15
VIT_13s0019g03700.t01	Wine grape	plastid	63.37	64.97
AT1G07900.1	Thale cress	plastid	60.89	64.74
GSMUA_Achr7P15500_001	Banana	nucleus	61.88	63.78
KRG91848	Soybean	plastid	69.31	63.06
KRH34918	Soybean	plastid	68.81	62.61
CDY22713	Canola	plastid	56.93	60.21
CDY06285	Canola	nucleus, plastid	55.94	59.47
Bra018675.1-P	Field mustard	plastid	60.4	59.22
GSMUA_Achr8P09700_001	Banana	cytosol	58.91	58.33
Bra031599.1-P	Field mustard	nucleus, plastid	57.92	56.52
GSMUA_Achr4P16790_001	Banana	plastid	52.97	56.32
CDY15755	Canola	plastid	59.9	55.76
CDY62454	Canola	plastid	59.41	55.3
CDY04570	Canola	plastid	59.41	55.05
CDX77182	Canola	plastid	58.91	54.84
AT2G28500.1	Thale cress	plastid	62.87	54.74
CDY31207	Canola	plastid	58.42	54.63
Bra035698.1-P	Field mustard	plastid	61.88	54.59
Bra000491.1-P	Field mustard	plastid	61.39	53.68
CDX83290	Canola	plastid	61.39	53.68
Bra011942.1-P	Field mustard	plastid	61.88	53.65
EER92422	Sorghum	plastid	60.89	52.34
CDX93609	Canola	nucleus	57.92	52.0
Zm00001d028721_P001	Maize	plastid	60.4	51.91
GSMUA_Achr10P...	Banana	plastid	63.86	51.6
TraesCS1A01G062200.1	Wheat	cytosol, plastid	52.48	51.46
TraesCS4B01G197100.1	Wheat	plastid	56.44	51.12
TraesCS4D01G197400.1	Wheat	plastid	56.44	51.12
HORVU4Hr1G056890.2	Barley	plastid	56.44	50.89
Zm00001d035498_P001	Maize	plastid	55.45	50.68
KRH50484	Soybean	cytosol, nucleus, plastid	39.6	50.31
TraesCS4A01G107300.1	Wheat	plastid	55.45	50.22
Zm00001d047752_P001	Maize	plastid	59.41	50.21
CDX95115	Canola	plastid	56.44	50.0
Os03t0287400-01	Rice	plastid	58.91	49.79
EES18939	Sorghum	plastid	53.96	49.77
TraesCS1B01G080600.1	Wheat	cytosol, plastid	52.97	49.77
TraesCS2D01G008400.1	Wheat	plastid	52.97	49.77
HORVU1Hr1G012720.1	Barley	cytosol, plastid	52.97	49.77
KRG89441	Soybean	cytosol, nucleus, plastid	39.6	48.78
Zm00001d010978_P001	Maize	plastid	50.0	47.64
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	25.25	47.22
KRG98217	Soybean	mitochondrion	40.1	47.09
KRH14912	Soybean	nucleus	35.64	47.06
KRH43747	Soybean	mitochondrion	41.09	46.89
KRH73255	Soybean	mitochondrion, nucleus, plastid	35.64	46.75
Solyc06g075330.1.1	Tomato	golgi, nucleus, plastid	55.94	46.69
KRG97685	Soybean	mitochondrion, nucleus	38.12	46.67
KRH30173	Soybean	mitochondrion, nucleus	39.6	46.51
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	39.11	46.47
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	38.61	45.88
KRH13706	Soybean	mitochondrion	40.1	45.51
GSMUA_Achr3P17800_001	Banana	mitochondrion, plastid	51.49	44.44
KRH56556	Soybean	nucleus, plastid	33.66	40.0
KRG93235	Soybean	plastid	33.17	39.88
KRH07170	Soybean	plastid	32.67	36.67
KRH63606	Soybean	plastid	32.67	36.26
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	32.18	35.71
KRH54338	Soybean	plastid	32.67	35.68
KRH03242	Soybean	nucleus, plastid	32.67	34.92
KRH57118	Soybean	plastid	32.67	33.5
KRH20638	Soybean	nucleus	33.66	31.78
KRH13283	Soybean	nucleus	33.17	31.6
KRH64170	Soybean	nucleus	34.16	31.08
KRH62409	Soybean	nucleus	32.18	30.66
KRH53776	Soybean	nucleus	33.66	30.63
KRH53127	Soybean	nucleus	30.2	29.9
KRH17149	Soybean	cytosol, mitochondrion, nucleus	35.15	28.51
KRG88909	Soybean	nucleus	30.2	28.5
KRH72805	Soybean	cytosol, mitochondrion, nucleus	35.64	28.46
KRH57745	Soybean	nucleus	32.18	23.55
KRH28509	Soybean	nucleus	35.64	23.38
KRH76950	Soybean	nucleus	35.15	23.36

Protein Annotations

EMBL:ACUP02007191	EnsemblPlants:KRH24932	EnsemblPlantsGene:GLYMA_12G072000	InterPro:IPR004883	InterPro:LOB	ncoils:Coil
PANTHER:PTHR31301	PANTHER:PTHR31301:SF6	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH24932	ProteinID:KRH24932.1
SEG:seg	UniParc:UPI000233D5BC	UniProt:I1LQZ6	MapMan:15.5.24	:	:

Description

hypothetical protein

Coordinates

chr12:-:5293321..5295428

Molecular Weight (calculated)

22030.3 Da

IEP (calculated)

5.669

GRAVY (calculated)

-0.222

Length

202 amino acids

Sequence
(BLAST)

001: MENSDISSAP LSHSPTNSSS SSPTPPSPPT VVMSPCAACK ILRRRCAEKC VLAPYFPPTE PAKFTIAHRV FGASNIIKFL QELPESQRAD AVTSMVYEAS
101: ARIRDPVYGC AGAICQLQKQ INELQAQLAK AQAELVNMQI QQANLVALIC MKMAQSPQES PQQLVDDFIS TPPHSGGAYQ SGMNFFEDNT SLNSLWEQPL
201: WT

Best Arabidopsis Sequence Match ( AT1G07900.1 )
(BLAST)

001: MESKSDASVA TTPIISSSSS PPPSLSPRVV LSPCAACKIL RRRCAERCVL APYFPPTDPA KFTIAHRVFG ASNIIKFLQE LPESQRTDAV NSMVYEAEAR
101: IRDPVYGCAG AIYHLQRQVS ELQAQLAKAQ VEMVNMQFQR SNLLELIYNM DQQQKQEQDN MSFESNDLGF LEDKSNTNSS MLWWDPLWTC

Arabidopsis Description

LBD1LBD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WM56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.