Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66870.1 | KRG99521 | AT2G37630.1 | 16243907 |
| AT5G66870.1 | KRG99949 | AT2G37630.1 | 16243907 |
| AT5G66870.1 | KRH49100 | AT2G37630.1 | 16243907 |
| AT5G66870.1 | KRH66092 | AT2G37630.1 | 16243907 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62409 | Soybean | nucleus | 84.31 | 81.13 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 26.96 | 50.93 |
| VIT_00s1247g00010.t01 | Wine grape | nucleus | 52.94 | 44.81 |
| KRG93235 | Soybean | plastid | 34.8 | 42.26 |
| KRH56556 | Soybean | nucleus, plastid | 34.8 | 41.76 |
| VIT_07s0197g00030.t01 | Wine grape | nucleus | 48.04 | 40.0 |
| KRH14912 | Soybean | nucleus | 29.9 | 39.87 |
| KRH03242 | Soybean | nucleus, plastid | 36.76 | 39.68 |
| KRH54338 | Soybean | plastid | 35.78 | 39.46 |
| KRH07170 | Soybean | plastid | 34.8 | 39.44 |
| KRH13283 | Soybean | nucleus | 40.69 | 39.15 |
| KRH76950 | Soybean | nucleus | 58.33 | 39.14 |
| KRH63606 | Soybean | plastid | 34.8 | 39.01 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 34.8 | 39.01 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 29.41 | 38.96 |
| VIT_07s0197g00020.t01 | Wine grape | nucleus | 55.39 | 38.7 |
| KRH28509 | Soybean | nucleus | 58.33 | 38.64 |
| KRH57118 | Soybean | plastid | 37.25 | 38.58 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 29.9 | 38.36 |
| KRH20638 | Soybean | nucleus | 40.2 | 38.32 |
| KRG97685 | Soybean | mitochondrion, nucleus | 30.88 | 38.18 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 30.39 | 37.8 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 30.39 | 36.47 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 30.39 | 36.47 |
| KRH57745 | Soybean | nucleus | 49.02 | 36.23 |
| PGSC0003DMT400002013 | Potato | nucleus | 50.49 | 35.89 |
| KRG98217 | Soybean | mitochondrion | 29.9 | 35.47 |
| KRH30173 | Soybean | mitochondrion, nucleus | 29.9 | 35.47 |
| PGSC0003DMT400002011 | Potato | nucleus | 50.0 | 35.42 |
| Solyc02g065150.1.1 | Tomato | nucleus | 50.49 | 35.4 |
| VIT_16s0022g02050.t01 | Wine grape | cytosol, mitochondrion, nucleus | 49.51 | 35.19 |
| VIT_07s0197g00040.t01 | Wine grape | cytosol, nucleus, plastid | 51.47 | 35.12 |
| KRG88909 | Soybean | nucleus | 36.76 | 35.05 |
| KRH43747 | Soybean | mitochondrion | 30.39 | 35.03 |
| KRH13706 | Soybean | mitochondrion | 29.9 | 34.27 |
| KRH10407 | Soybean | mitochondrion | 27.94 | 33.14 |
| Bra012112.1-P | Field mustard | nucleus, plastid | 54.9 | 33.14 |
| CDY12784 | Canola | nucleus, plastid | 54.41 | 33.04 |
| CDY49845 | Canola | nucleus, plastid | 50.49 | 33.01 |
| AT5G66870.1 | Thale cress | nucleus | 50.49 | 32.91 |
| PGSC0003DMT400025959 | Potato | nucleus | 50.49 | 32.91 |
| CDY01457 | Canola | nucleus, plastid | 54.41 | 32.84 |
| Solyc02g090410.2.1 | Tomato | mitochondrion, plastid | 50.0 | 32.38 |
| CDY52150 | Canola | nucleus, plastid | 49.02 | 31.65 |
| EER93817 | Sorghum | plastid | 44.61 | 30.64 |
| GSMUA_Achr6P04670_001 | Banana | mitochondrion | 43.14 | 30.56 |
| KRG89044 | Soybean | nucleus, plastid | 30.39 | 30.39 |
| KRH24932 | Soybean | nucleus, plastid | 29.9 | 30.2 |
| TraesCS4D01G078800.1 | Wheat | mitochondrion, nucleus, plastid | 41.67 | 29.93 |
| TraesCS4B01G079900.1 | Wheat | mitochondrion, nucleus, plastid | 41.67 | 29.93 |
| Zm00001d033335_P001 | Maize | plastid | 41.18 | 29.89 |
| KRH22937 | Soybean | plastid | 28.43 | 29.29 |
| TraesCS4A01G235100.1 | Wheat | nucleus | 41.18 | 29.17 |
| Zm00001d013732_P001 | Maize | plastid | 42.16 | 28.76 |
| Bra032153.1-P | Field mustard | mitochondrion, nucleus | 41.67 | 27.6 |
| CDX68120 | Canola | mitochondrion, nucleus | 41.67 | 27.6 |
| CDX89590 | Canola | mitochondrion, nucleus | 41.67 | 27.6 |
| HORVU4Hr1G013630.2 | Barley | nucleus | 40.69 | 27.57 |
| AT2G23660.2 | Thale cress | mitochondrion, nucleus | 40.69 | 26.69 |
| KRH53776 | Soybean | nucleus | 28.43 | 26.13 |
| KRH34918 | Soybean | plastid | 28.43 | 26.13 |
| KRH64170 | Soybean | nucleus | 27.94 | 25.68 |
| KRG91848 | Soybean | plastid | 27.94 | 25.68 |
| CDX81360 | Canola | plastid | 40.2 | 24.48 |
| CDY18621 | Canola | nucleus, plastid | 36.27 | 24.42 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 28.43 | 23.29 |
| GSMUA_Achr2P17160_001 | Banana | mitochondrion | 34.31 | 23.26 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 27.94 | 22.53 |
| Bra037142.1-P | Field mustard | nucleus, plastid | 40.2 | 20.81 |
| Os03t0612400-00 | Rice | cytosol, nucleus | 39.71 | 20.4 |
Protein Annotations
| EMBL:ACUP02003451 | EnsemblPlants:KRH53127 | EnsemblPlantsGene:GLYMA_06G106500 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil |
| PANTHER:PTHR31301 | PANTHER:PTHR31301:SF63 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH53127 | ProteinID:KRH53127.1 |
| SEG:seg | UniParc:UPI0006EE13AB | UniProt:A0A0R0JEY4 | MapMan:15.5.24 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:8569413..8571120
Molecular Weight (calculated)
22387.5 Da
IEP (calculated)
8.272
GRAVY (calculated)
-0.498
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSNSPCA ACKIQRRKCT QECVFAPYFP PDNPQRNVAK LLNELNAAQR EDAVKSLAYE AEARLRDPVY GCVGLISILQ HRLKQLQNEL HHAKKELASH
101: IGSHTMLPPA PSLLPPEQQP RTFSLFPFKP ASTHQHDLFG FHDDGGASSA SHAGGFNSHL AAVFSPSPAV DHAFSHAPMQ SLTLPHHQHL MRSPMQPKPQ
201: TDPA
101: IGSHTMLPPA PSLLPPEQQP RTFSLFPFKP ASTHQHDLFG FHDDGGASSA SHAGGFNSHL AAVFSPSPAV DHAFSHAPMQ SLTLPHHQHL MRSPMQPKPQ
201: TDPA
001: MASSSSPCAA CKFLRRKCTQ ECVFAPYFPP DQPQKFAFVH KVFGASNVAK LLNELASNQR EDAVNSLFYE AEARLRDPVY GCVGLISILQ HRLKQVNHDL
101: ENAKKELATY VGPQAMLPIL QPHFMSLPPQ PQRPSSSSAS VLTQHHHNLL PMMAIPTGQL YHQQQQQIFE AQQLAAVARE QQNEMFRAYG GGGGSSSPHH
201: QNQAQAEILR FNNGFDSVPA GSVTVTGFNQ LSSGGTAVTG MSLGGNFVDS PSTNNNYHTD QQLHHHHQPQ QHHEAQLFIP SQSSQPLPLQ TQETQTQTQP
301: NSESEEGRRN VIG
101: ENAKKELATY VGPQAMLPIL QPHFMSLPPQ PQRPSSSSAS VLTQHHHNLL PMMAIPTGQL YHQQQQQIFE AQQLAAVARE QQNEMFRAYG GGGGSSSPHH
201: QNQAQAEILR FNNGFDSVPA GSVTVTGFNQ LSSGGTAVTG MSLGGNFVDS PSTNNNYHTD QQLHHHHQPQ QHHEAQLFIP SQSSQPLPLQ TQETQTQTQP
301: NSESEEGRRN VIG
Arabidopsis Description
LBD36LOB domain-containing protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.