CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73255	Soybean	mitochondrion, nucleus, plastid	96.73	96.1
CDY51008	Canola	mitochondrion	68.63	75.54
KRG97685	Soybean	mitochondrion, nucleus	80.39	74.55
CDY72536	Canola	mitochondrion	66.67	73.91
GSMUA_Achr6P15660_001	Banana	mitochondrion, nucleus, plastid	76.47	72.22
GSMUA_Achr9P18030_001	Banana	mitochondrion, nucleus, plastid	74.51	70.37
KRH30173	Soybean	mitochondrion, nucleus	77.78	69.19
GSMUA_Achr3P10050_001	Banana	cytosol, nucleus, plastid	69.93	68.59
GSMUA_Achr10P...	Banana	mitochondrion	70.59	68.35
KRG98217	Soybean	mitochondrion	76.47	68.02
GSMUA_Achr10P...	Banana	mitochondrion	69.93	67.72
Bra018335.1-P	Field mustard	mitochondrion	74.51	60.32
CDY10714	Canola	mitochondrion	74.51	60.32
AT2G30130.1	Thale cress	mitochondrion, nucleus	75.16	59.59
Bra021612.1-P	Field mustard	nucleus	73.2	58.95
Bra022780.1-P	Field mustard	mitochondrion, nucleus	71.24	57.98
CDY24027	Canola	mitochondrion	71.24	57.98
KRH50484	Soybean	cytosol, nucleus, plastid	58.17	55.97
KRG89441	Soybean	cytosol, nucleus, plastid	58.82	54.88
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	37.25	52.78
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	58.17	52.35
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	58.17	52.35
KRH43747	Soybean	mitochondrion	60.13	51.98
KRH13706	Soybean	mitochondrion	59.48	51.12
KRG93235	Soybean	plastid	47.71	43.45
KRH56556	Soybean	nucleus, plastid	47.06	42.35
KRH10407	Soybean	mitochondrion	46.41	41.28
KRH63606	Soybean	plastid	49.02	41.21
KRH07170	Soybean	plastid	47.71	40.56
KRH54338	Soybean	plastid	49.02	40.54
KRH03242	Soybean	nucleus, plastid	49.02	39.68
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	47.06	39.56
KRH57118	Soybean	plastid	49.02	38.07
KRH22937	Soybean	plastid	46.41	35.86
KRH24932	Soybean	nucleus, plastid	47.06	35.64
KRH53776	Soybean	nucleus	51.63	35.59
KRG89044	Soybean	nucleus, plastid	46.41	34.8
KRH64170	Soybean	nucleus	50.33	34.68
KRG91848	Soybean	plastid	50.33	34.68
KRH34918	Soybean	plastid	49.67	34.23
KRH13283	Soybean	nucleus	47.06	33.96
KRH20638	Soybean	nucleus	47.06	33.64
KRG88909	Soybean	nucleus	45.75	32.71
KRH62409	Soybean	nucleus	45.1	32.55
KRH17149	Soybean	cytosol, mitochondrion, nucleus	50.33	30.92
KRH72805	Soybean	cytosol, mitochondrion, nucleus	50.33	30.43
KRH53127	Soybean	nucleus	39.87	29.9
KRH57745	Soybean	nucleus	50.98	28.26
KRH76950	Soybean	nucleus	47.71	24.01
KRH28509	Soybean	nucleus	47.71	23.7

Protein Annotations

EMBL:ACUP02008541	EnsemblPlants:KRH14912	EnsemblPlantsGene:GLYMA_14G056700	EntrezGene:100812780	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF57	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH14912
ProteinID:KRH14912.1	UniParc:UPI000233AFC9	UniProt:I1M7R0	MapMan:15.5.24	:	:

Description

hypothetical protein

Coordinates

chr14:-:4523958..4525089

Molecular Weight (calculated)

17053.4 Da

IEP (calculated)

6.077

GRAVY (calculated)

-0.124

Length

153 amino acids

Sequence
(BLAST)

001: MGGNSPCASC KLLRRRCTKD CTFAPYFPSD DPQKFAIVHK VFGASNVSKM LQELPVHQRA DAVSSLVYEA NARVRDPVYG CVGAISYLQN QVSELQMQLA
101: VAQAEILCIQ MEHEPVMPAS QIDLDHKSYF LQNDLSQFLA FDSSSNVMQQ FCP

Best Arabidopsis Sequence Match ( AT2G30130.1 )
(BLAST)

001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT

Arabidopsis Description

LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.