Factsheet for GSMUA_Achr10P13050_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	98.73	98.73
GSMUA_Achr6P15660_001	Banana	mitochondrion, nucleus, plastid	77.85	75.93
GSMUA_Achr9P18030_001	Banana	mitochondrion, nucleus, plastid	74.05	72.22
KRH14912	Soybean	nucleus	68.35	70.59
VIT_06s0004g07200.t01	Wine grape	mitochondrion, nucleus	72.78	70.55
GSMUA_Achr3P10050_001	Banana	cytosol, nucleus, plastid	69.62	70.51
KRH73255	Soybean	mitochondrion, nucleus, plastid	67.72	69.48
KRG98217	Soybean	mitochondrion	73.42	67.44
KRH30173	Soybean	mitochondrion, nucleus	73.42	67.44
KRG97685	Soybean	mitochondrion, nucleus	70.25	67.27
GSMUA_Achr5P29470_001	Banana	mitochondrion, nucleus	59.49	65.73
VIT_13s0067g01880.t01	Wine grape	mitochondrion	68.99	63.74
PGSC0003DMT400078256	Potato	mitochondrion, nucleus, plastid	68.99	63.01
Solyc06g082310.2.1	Tomato	mitochondrion, nucleus, plastid	68.99	62.64
Solyc06g050950.2.1	Tomato	mitochondrion, nucleus, plastid	64.56	59.65
PGSC0003DMT400061511	Potato	mitochondrion	64.56	59.65
TraesCS1D01G224000.1	Wheat	mitochondrion	70.89	59.26
TraesCS1A01G222300.1	Wheat	mitochondrion	70.89	59.26
TraesCS1B01G235700.1	Wheat	mitochondrion	70.89	59.26
GSMUA_Achr8P02800_001	Banana	mitochondrion, nucleus	60.76	58.9
Zm00001d038013_P001	Maize	mitochondrion	72.15	58.46
Os05t0346800-00	Rice	cytosol, nucleus	72.78	55.56
EES19343	Sorghum	mitochondrion	71.52	52.07
GSMUA_Achr5P02190_001	Banana	mitochondrion	51.27	48.8
HORVU1Hr1G060290.2	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.89	48.07
GSMUA_Achr2P13170_001	Banana	nucleus	51.27	46.55
GSMUA_Achr4P32000_001	Banana	cytosol, mitochondrion, nucleus, plastid	52.53	45.6
GSMUA_Achr7P00880_001	Banana	cytosol, nucleus, plastid	53.16	45.16
GSMUA_Achr7P15500_001	Banana	nucleus	51.9	41.84
GSMUA_AchrUn_...	Banana	plastid	48.1	41.3
GSMUA_Achr6P33070_001	Banana	plastid	50.63	40.82
GSMUA_Achr4P16790_001	Banana	plastid	46.84	38.95
GSMUA_Achr9P04330_001	Banana	plastid	43.67	38.76
GSMUA_Achr8P09700_001	Banana	cytosol	48.1	37.25
GSMUA_Achr11P...	Banana	cytosol	50.0	36.41
GSMUA_Achr5P07460_001	Banana	nucleus	46.84	35.41
GSMUA_Achr7P22200_001	Banana	nucleus	46.84	35.07
GSMUA_Achr10P...	Banana	plastid	50.0	31.6
GSMUA_Achr3P17800_001	Banana	mitochondrion, plastid	46.2	31.2
GSMUA_Achr6P04670_001	Banana	mitochondrion	46.2	25.35
GSMUA_Achr2P17160_001	Banana	mitochondrion	36.71	19.27

Protein Annotations

EnsemblPlants:GSMUA_Achr10P13050_001	EnsemblPlants:GSMUA_Achr10T13050_001	EnsemblPlantsGene:GSMUA_Achr10G13050_001	InterPro:IPR004883	InterPro:LOB	ncoils:Coil
PANTHER:PTHR31301	PANTHER:PTHR31301:SF57	PFAM:PF03195	PFscan:PS50891	SEG:seg	UniParc:UPI0002957E96
UniProt:M0RHT1	MapMan:15.5.24	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G13050_001]

Coordinates

chr10:-:21865099..21865725

Molecular Weight (calculated)

17660.3 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.224

Length

158 amino acids

Sequence
(BLAST)

001: MGSHSPCASC KLLRRRCTPD CVFAPFFPSD EPHKFAMVHR VFGASNVSKM LQELPLHQRA DAVSSLVYEA NARMRDPVYG CVGAISYLQH QVSQLQMQLA
101: LAQAEMLCIQ MQQAQLMDAD GMQYLMQSDL SAVAQLTNYP SSSSNVPHEP LKRENPWT

Best Arabidopsis Sequence Match ( AT1G31320.1 )
(BLAST)

001: MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID
101: VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN KGMFSHMDIV DEASLGESMW SC

Arabidopsis Description

LBD4LOB domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHE9]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.