Factsheet for Os05t0346800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51008	Canola	mitochondrion	52.17	77.7
TraesCS1A01G222300.1	Wheat	mitochondrion	70.53	77.25
TraesCS1D01G224000.1	Wheat	mitochondrion	70.53	77.25
TraesCS1B01G235700.1	Wheat	mitochondrion	70.53	77.25
CDY72536	Canola	mitochondrion	50.72	76.09
GSMUA_Achr9P18030_001	Banana	mitochondrion, nucleus, plastid	58.94	75.31
GSMUA_Achr6P15660_001	Banana	mitochondrion, nucleus, plastid	58.94	75.31
Zm00001d038013_P001	Maize	mitochondrion	69.08	73.33
VIT_06s0004g07200.t01	Wine grape	mitochondrion, nucleus	57.49	73.01
GSMUA_Achr10P...	Banana	mitochondrion	55.56	72.78
GSMUA_Achr3P10050_001	Banana	cytosol, nucleus, plastid	54.59	72.44
GSMUA_Achr10P...	Banana	mitochondrion	55.07	72.15
KRH30173	Soybean	mitochondrion, nucleus	56.04	67.44
EES19343	Sorghum	mitochondrion	70.53	67.28
KRG98217	Soybean	mitochondrion	55.56	66.86
Solyc06g082310.2.1	Tomato	mitochondrion, nucleus, plastid	55.56	66.09
PGSC0003DMT400078256	Potato	mitochondrion, nucleus, plastid	55.07	65.9
Os12t0106200-01	Rice	mitochondrion	49.28	65.38
Os11t0106900-01	Rice	mitochondrion	49.28	65.38
VIT_13s0067g01880.t01	Wine grape	mitochondrion	53.62	64.91
HORVU1Hr1G060290.2	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.53	62.66
Solyc06g050950.2.1	Tomato	mitochondrion, nucleus, plastid	51.69	62.57
PGSC0003DMT400061511	Potato	mitochondrion	51.69	62.57
Bra018335.1-P	Field mustard	mitochondrion	56.04	61.38
CDY10714	Canola	mitochondrion	56.04	61.38
Bra021612.1-P	Field mustard	nucleus	55.56	60.53
AT2G30130.1	Thale cress	mitochondrion, nucleus	55.56	59.59
CDY24027	Canola	mitochondrion	53.62	59.04
Bra022780.1-P	Field mustard	mitochondrion, nucleus	53.62	59.04
Os01t0169400-01	Rice	plastid	36.23	29.88
Os03t0287400-01	Rice	plastid	34.3	29.71
Os01t0825000-01	Rice	cytosol	35.27	29.08
Os05t0165450-00	Rice	extracellular	34.78	29.03
Os01t0889400-02	Rice	plastid	35.75	27.51
Os05t0417000-00	Rice	plastid	36.23	26.88
Os03t0612400-00	Rice	cytosol, nucleus	36.23	18.89

Protein Annotations

MapMan:15.5.24	UniProt:A0A0P0WKY8	ProteinID:BAS93504.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006259	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009330	GO:GO:0009987	GO:GO:0042023	InterPro:IPR004883	InterPro:LOB	EnsemblPlantsGene:Os05g0346800
EnsemblPlants:Os05t0346800-00	PFAM:PF03195	PFscan:PS50891	PANTHER:PTHR31301	PANTHER:PTHR31301:SF60	UniParc:UPI0003938AB1
SEG:seg	:	:	:	:	:

Description

Similar to ASL5; DNA binding / protein binding. (Os05t0346800-00)

Coordinates

chr5:-:16327564..16328326

Molecular Weight (calculated)

21963.0 Da

IEP (calculated)

6.590

GRAVY (calculated)

-0.214

Length

207 amino acids

Sequence
(BLAST)

001: IDREREGMGG GSPCASCKLL RRRCTKDCIF APFFPADDPH KFAIVHKVFG ASNVSKMLQE LPAQQRGDAV SSLVYEANAR MRDPVYGCVG AISFLQNQVS
101: QLQMQLAVAQ AEILCIQMQH RDDGAAHQLD AAADHHPLLD QQQQQQMVVD AADAAASFLV QNGGGGGGPA AQLISGYGSP AAGGGGGHGV VHYAAAQEHL
201: KRESLWT

Best Arabidopsis Sequence Match ( AT2G30130.1 )
(BLAST)

001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT

Arabidopsis Description

LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.