Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 5
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0106200-01 | Rice | mitochondrion | 100.0 | 100.0 |
| TraesCS5B01G150800.1 | Wheat | plastid | 64.74 | 57.06 |
| TraesCS5D01G157400.1 | Wheat | plastid | 64.74 | 57.06 |
| HORVU5Hr1G047610.1 | Barley | plastid | 64.1 | 56.5 |
| TraesCS5A01G152200.1 | Wheat | plastid | 64.1 | 56.5 |
| KXG22772 | Sorghum | plastid | 68.59 | 51.44 |
| EES07852 | Sorghum | plastid | 67.31 | 49.3 |
| Os05t0346800-00 | Rice | cytosol, nucleus | 65.38 | 49.28 |
| Os01t0169400-01 | Rice | plastid | 48.72 | 30.28 |
| Os01t0825000-01 | Rice | cytosol | 45.51 | 28.29 |
| Os05t0165450-00 | Rice | extracellular | 44.23 | 27.82 |
| Os03t0287400-01 | Rice | plastid | 41.03 | 26.78 |
| Os01t0889400-02 | Rice | plastid | 44.87 | 26.02 |
| Os05t0417000-00 | Rice | plastid | 44.87 | 25.09 |
| Os03t0612400-00 | Rice | cytosol, nucleus | 44.87 | 17.63 |
Protein Annotations
| MapMan:15.5.24 | EntrezGene:4349560 | EntrezGene:4351265 | ProteinID:ABA91089.1 | ProteinID:ABA95617.1 | EMBL:AK241761 |
| ProteinID:BAF27387.1 | ProteinID:BAF28957.1 | ProteinID:BAT12324.1 | ProteinID:BAT15502.1 | ncoils:Coil | ProteinID:EAZ19388.1 |
| InterPro:IPR004883 | InterPro:LOB | EnsemblPlantsGene:Os11g0106900 | EnsemblPlants:Os11t0106900-01 | PFAM:PF03195 | PFscan:PS50891 |
| PANTHER:PTHR31301 | PANTHER:PTHR31301:SF15 | UniProt:Q2QYU3 | UniParc:UPI0000682653 | RefSeq:XP_015617628.1 | RefSeq:XP_015618081.1 |
| RefSeq:XP_015618082.1 | RefSeq:XP_015618083.1 | SEG:seg | : | : | : |
Description
LBD family transcription factor 11-1, lateral organ boundaries domain protein 11-1Lateral organ boundaries, LOB domain containing protein. (Os11t0106900-01)
Coordinates
chr11:+:314530..315329
Molecular Weight (calculated)
17405.9 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.254
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGSGTPC ASCKLLRRRC TSECVFAPYF PAEEAQRFAM VHRVFGASNV SKMLLDVPPP QRPDAVSSLV YEANARMRDP VYGCVAAISF LQNQVSQLQM
101: QLALAHAETA ALQLQLQQQH QDQDDHHHQQ CILENAAAHH QLMLQEAFLK KESMWT
101: QLALAHAETA ALQLQLQQQH QDQDDHHHQQ CILENAAAHH QLMLQEAFLK KESMWT
001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
Arabidopsis Description
LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.