Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 5
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51008 | Canola | mitochondrion | 92.75 | 92.09 |
| Bra022780.1-P | Field mustard | mitochondrion, nucleus | 100.0 | 73.4 |
| VIT_06s0004g07200.t01 | Wine grape | mitochondrion, nucleus | 85.51 | 72.39 |
| CDY24027 | Canola | mitochondrion | 98.55 | 72.34 |
| CDY10714 | Canola | mitochondrion | 95.65 | 69.84 |
| AT2G30130.1 | Thale cress | mitochondrion, nucleus | 96.38 | 68.91 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 74.64 | 66.88 |
| KRH14912 | Soybean | nucleus | 73.91 | 66.67 |
| PGSC0003DMT400078256 | Potato | mitochondrion, nucleus, plastid | 83.33 | 66.47 |
| GSMUA_Achr5P29470_001 | Banana | mitochondrion, nucleus | 68.84 | 66.43 |
| Solyc06g082310.2.1 | Tomato | mitochondrion, nucleus, plastid | 83.33 | 66.09 |
| KRH30173 | Soybean | mitochondrion, nucleus | 81.88 | 65.7 |
| KRG98217 | Soybean | mitochondrion | 81.16 | 65.12 |
| VIT_13s0067g01880.t01 | Wine grape | mitochondrion | 77.54 | 62.57 |
| PGSC0003DMT400061511 | Potato | mitochondrion | 74.64 | 60.23 |
| Solyc06g050950.2.1 | Tomato | mitochondrion, nucleus, plastid | 73.91 | 59.65 |
| KRG97685 | Soybean | mitochondrion, nucleus | 71.01 | 59.39 |
| TraesCS1D01G224000.1 | Wheat | mitochondrion | 76.81 | 56.08 |
| TraesCS1B01G235700.1 | Wheat | mitochondrion | 76.81 | 56.08 |
| TraesCS1A01G222300.1 | Wheat | mitochondrion | 76.81 | 56.08 |
| Zm00001d038013_P001 | Maize | mitochondrion | 74.64 | 52.82 |
| CDX83724 | Canola | plastid | 49.28 | 51.52 |
| CDY13730 | Canola | plastid | 49.28 | 51.52 |
| CDX81767 | Canola | cytosol, nucleus, plastid | 60.87 | 51.22 |
| Os05t0346800-00 | Rice | cytosol, nucleus | 76.09 | 50.72 |
| CDY03987 | Canola | plastid | 47.83 | 50.0 |
| CDX77553 | Canola | cytosol, mitochondrion, nucleus, plastid | 61.59 | 49.42 |
| CDY50999 | Canola | cytosol, mitochondrion, plastid | 58.7 | 49.39 |
| CDY40054 | Canola | mitochondrion | 57.97 | 49.08 |
| CDY20041 | Canola | plastid | 46.38 | 48.85 |
| EES19343 | Sorghum | mitochondrion | 76.81 | 48.85 |
| CDY50718 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.87 | 48.84 |
| CDY49773 | Canola | plastid | 46.38 | 48.48 |
| CDY66794 | Canola | mitochondrion | 57.25 | 48.47 |
| HORVU1Hr1G060290.2 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 76.81 | 45.49 |
| CDY48125 | Canola | plastid | 53.62 | 42.05 |
| CDY16738 | Canola | plastid | 53.62 | 42.05 |
| CDY69697 | Canola | plastid | 55.07 | 41.99 |
| CDY68853 | Canola | plastid | 54.35 | 41.44 |
| CDY22713 | Canola | plastid | 54.35 | 39.27 |
| CDY06285 | Canola | nucleus, plastid | 53.62 | 38.95 |
| CDY23903 | Canola | plastid | 55.8 | 38.89 |
| CDY67958 | Canola | plastid | 55.8 | 38.89 |
| CDY06988 | Canola | plastid | 55.07 | 37.81 |
| CDY04570 | Canola | plastid | 56.52 | 35.78 |
| CDY62454 | Canola | plastid | 55.8 | 35.48 |
| CDY15755 | Canola | plastid | 55.8 | 35.48 |
| CDX77182 | Canola | plastid | 55.8 | 35.48 |
| CDY31207 | Canola | plastid | 54.35 | 34.72 |
| CDY16414 | Canola | nucleus, plastid | 50.72 | 34.65 |
| CDY46781 | Canola | nucleus, plastid | 50.72 | 34.65 |
| CDX93178 | Canola | cytosol, nucleus, plastid | 56.52 | 34.36 |
| CDY24903 | Canola | mitochondrion | 57.25 | 34.2 |
| CDX93609 | Canola | nucleus | 55.07 | 33.78 |
| CDY07604 | Canola | mitochondrion | 56.52 | 33.62 |
| CDX95115 | Canola | plastid | 55.07 | 33.33 |
| CDX83290 | Canola | plastid | 55.07 | 32.9 |
| CDY02059 | Canola | mitochondrion | 54.35 | 31.78 |
| CDY10726 | Canola | mitochondrion | 54.35 | 31.78 |
| CDY49845 | Canola | nucleus, plastid | 52.17 | 23.08 |
| CDY52150 | Canola | nucleus, plastid | 52.17 | 22.78 |
| CDX68120 | Canola | mitochondrion, nucleus | 50.0 | 22.4 |
| CDX89590 | Canola | mitochondrion, nucleus | 50.0 | 22.4 |
| CDY12784 | Canola | nucleus, plastid | 52.17 | 21.43 |
| CDY01457 | Canola | nucleus, plastid | 52.17 | 21.3 |
| CDY18621 | Canola | nucleus, plastid | 45.65 | 20.79 |
| CDX81360 | Canola | plastid | 50.0 | 20.6 |
Protein Annotations
| EnsemblPlants:CDY72536 | EnsemblPlantsGene:GSBRNA2T00030430001 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF57 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDY72536 | ProteinID:CDY72536.1 | UniParc:UPI0004EEC124 |
| UniProt:A0A078K453 | MapMan:15.5.24 | : | : | : | : |
Description
BnaA03g56340DBnaA03g56340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K453]
Coordinates
chrLK051656:-:548..1362
Molecular Weight (calculated)
15463.7 Da
IEP (calculated)
7.468
GRAVY (calculated)
-0.228
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGPGSSPCA SCKLLRRRCA KECIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVTQLQMQ
101: LAVAQTEILC IQMQHEPTLQ SHHEMQMQDP LKQESLWT
101: LAVAQTEILC IQMQHEPTLQ SHHEMQMQDP LKQESLWT
001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
Arabidopsis Description
LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.