Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P18030_001 | Banana | mitochondrion, nucleus, plastid | 66.26 | 66.67 |
| GSMUA_Achr3P10050_001 | Banana | cytosol, nucleus, plastid | 62.58 | 65.38 |
| GSMUA_Achr6P15660_001 | Banana | mitochondrion, nucleus, plastid | 64.42 | 64.81 |
| GSMUA_Achr5P29470_001 | Banana | mitochondrion, nucleus | 56.44 | 64.34 |
| GSMUA_Achr10P... | Banana | mitochondrion | 58.9 | 60.76 |
| GSMUA_Achr10P... | Banana | mitochondrion | 58.28 | 60.13 |
| GSMUA_Achr5P02190_001 | Banana | mitochondrion | 49.69 | 48.8 |
| GSMUA_Achr2P13170_001 | Banana | nucleus | 47.85 | 44.83 |
| GSMUA_Achr7P00880_001 | Banana | cytosol, nucleus, plastid | 49.08 | 43.01 |
| GSMUA_Achr4P32000_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 47.85 | 42.86 |
| GSMUA_AchrUn_... | Banana | plastid | 44.17 | 39.13 |
| GSMUA_Achr7P15500_001 | Banana | nucleus | 45.4 | 37.76 |
| GSMUA_Achr6P33070_001 | Banana | plastid | 44.17 | 36.73 |
| GSMUA_Achr7P22200_001 | Banana | nucleus | 47.24 | 36.49 |
| GSMUA_Achr5P07460_001 | Banana | nucleus | 46.63 | 36.36 |
| GSMUA_Achr9P04330_001 | Banana | plastid | 39.26 | 35.96 |
| GSMUA_Achr11P... | Banana | cytosol | 47.24 | 35.48 |
| GSMUA_Achr4P16790_001 | Banana | plastid | 41.1 | 35.26 |
| GSMUA_Achr8P09700_001 | Banana | cytosol | 43.56 | 34.8 |
| GSMUA_Achr3P17800_001 | Banana | mitochondrion, plastid | 41.1 | 28.63 |
| GSMUA_Achr10P... | Banana | plastid | 43.56 | 28.4 |
| GSMUA_Achr6P04670_001 | Banana | mitochondrion | 42.94 | 24.31 |
| GSMUA_Achr2P17160_001 | Banana | mitochondrion | 36.2 | 19.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02800_001 | EnsemblPlants:GSMUA_Achr8T02800_001 | EnsemblPlantsGene:GSMUA_Achr8G02800_001 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009965 | GO:GO:0010016 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF57 | PFAM:PF03195 | PFscan:PS50891 | UniParc:UPI0002951E2E | UniProt:M0TM32 | MapMan:15.5.24 |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G02800_001]
Coordinates
chr8:+:1938624..1939185
Molecular Weight (calculated)
18289.1 Da
IEP (calculated)
8.484
GRAVY (calculated)
-0.279
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGSPCASC KLLRRRCAKD CIFAPYFPPD DPYKFAIVHK VFGASNVSKM LKELSVHQRA DAVRSLVYEA NARMKDPIYG CVGVISYLED QVSQLQMQLA
101: VAQAEILWIQ MQQAESSMAN QQIIHAEDKS FVQHNSHTIV PQLMSFGSSS NGVREPLKRE RER
101: VAQAEILWIQ MQQAESSMAN QQIIHAEDKS FVQHNSHTIV PQLMSFGSSS NGVREPLKRE RER
001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT
Arabidopsis Description
LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.