CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53776	Soybean	nucleus	94.59	94.59
VIT_13s0067g02380.t01	Wine grape	nucleus	83.33	82.59
AT2G40470.1	Thale cress	cytosol, nucleus, plastid	72.97	72.32
CDY23903	Canola	plastid	64.41	72.22
CDY67958	Canola	plastid	64.41	72.22
Bra004572.1-P	Field mustard	cytosol, mitochondrion, nucleus	72.07	71.75
Bra000188.1-P	Field mustard	plastid	63.96	71.36
CDX93178	Canola	cytosol, nucleus, plastid	72.52	70.93
Bra016992.1-P	Field mustard	plastid	62.61	69.15
CDY06988	Canola	plastid	62.61	69.15
GSMUA_Achr11P...	Banana	cytosol	66.67	68.2
GSMUA_Achr5P07460_001	Banana	nucleus	63.51	67.46
GSMUA_Achr7P22200_001	Banana	nucleus	63.51	66.82
GSMUA_AchrUn_...	Banana	plastid	54.5	65.76
CDY07604	Canola	mitochondrion	68.02	65.09
CDY24903	Canola	mitochondrion	67.57	64.94
HORVU1Hr1G024490.1	Barley	cytosol, mitochondrion, nucleus	47.75	63.86
KRH17149	Soybean	cytosol, mitochondrion, nucleus	68.92	61.45
KRH72805	Soybean	cytosol, mitochondrion, nucleus	69.82	61.26
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	25.68	52.78
TraesCS1D01G113100.1	Wheat	nucleus	55.86	52.77
Zm00001d043036_P001	Maize	cytosol	55.86	52.32
TraesCS1B01G131900.2	Wheat	nucleus	55.41	51.9
TraesCS3D01G340000.1	Wheat	cytosol	57.66	51.61
TraesCS1A01G111700.1	Wheat	nucleus	54.95	51.48
OQU87769	Sorghum	cytosol	57.21	51.0
TraesCS3A01G346300.1	Wheat	cytosol	56.76	50.4
KRH14912	Soybean	nucleus	34.68	50.33
KRH50484	Soybean	cytosol, nucleus, plastid	36.04	50.31
Os01t0825000-01	Rice	cytosol	56.76	50.2
KRH73255	Soybean	mitochondrion, nucleus, plastid	34.68	50.0
Os05t0165450-00	Rice	extracellular	55.86	50.0
KRG89441	Soybean	cytosol, nucleus, plastid	36.94	50.0
Zm00001d009823_P001	Maize	plastid	49.1	49.77
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	36.94	48.24
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	36.94	48.24
KRG97685	Soybean	mitochondrion, nucleus	35.14	47.27
KRG98217	Soybean	mitochondrion	36.04	46.51
KRH43747	Soybean	mitochondrion	36.94	46.33
KRH30173	Soybean	mitochondrion, nucleus	35.59	45.93
KRH13706	Soybean	mitochondrion	36.49	45.51
TraesCS3B01G378100.1	Wheat	plastid	56.76	43.15
KRG93235	Soybean	plastid	31.98	42.26
KRH56556	Soybean	nucleus, plastid	31.98	41.76
OQU77508	Sorghum	cytosol, nucleus, plastid	56.76	41.04
KRH63606	Soybean	plastid	32.88	40.11
KRH54338	Soybean	plastid	33.33	40.0
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	32.43	39.56
KRH07170	Soybean	plastid	31.98	39.44
KRH03242	Soybean	nucleus, plastid	33.33	39.15
KRH10407	Soybean	mitochondrion	30.18	38.95
HORVU3Hr1G088440.1	Barley	plastid	56.76	38.18
KRH57118	Soybean	plastid	33.33	37.56
KRG89044	Soybean	nucleus, plastid	31.98	34.8
KRH22937	Soybean	plastid	30.63	34.34
KRH24932	Soybean	nucleus, plastid	31.08	34.16
KRG88909	Soybean	nucleus	30.18	31.31
KRH62409	Soybean	nucleus	29.73	31.13
KRG91848	Soybean	plastid	31.08	31.08
KRH20638	Soybean	nucleus	29.73	30.84
KRH13283	Soybean	nucleus	29.28	30.66
KRH34918	Soybean	plastid	30.18	30.18
KRH53127	Soybean	nucleus	25.68	27.94
KRH57745	Soybean	nucleus	34.68	27.9
KRH76950	Soybean	nucleus	33.78	24.67
KRH28509	Soybean	nucleus	33.33	24.03

Protein Annotations

EMBL:ACUP02002743	EnsemblPlants:KRH64170	EnsemblPlantsGene:GLYMA_04G220500	EntrezGene:100786324	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF2	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH64169.1
ProteinID:KRH64170	ProteinID:KRH64170.1	SEG:seg	UniParc:UPI000233A05E	UniProt:I1JY97	MapMan:15.5.24

Description

hypothetical protein

Coordinates

chr4:+:49114695..49118736

Molecular Weight (calculated)

24369.5 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.348

Length

222 amino acids

Sequence
(BLAST)

001: MSRERERFDE IGKKIKREGD VSSQMGRRHM LGPPGTLNTI TPCAACKLLR RRCAQECPFS PYFSPHEPQK FASVHKVFGA SNVSKMLMEV PECQRADAAN
101: SLVYEANVRL RDPVYGCMGA ISALQQQVQS LQAELNAVRG EILKYKLREA NMIPSSHVAM LPSSGAVSIA APPPPPPPPP PLPPPSLPLP LPLTSSPPSM
201: YIQQRDPTTY TTISSDNISY FV

Best Arabidopsis Sequence Match ( AT2G40470.1 )
(BLAST)

001: MSRERERFEE IGKKIKREAD AWPHQMAGIR RPMSGPPGTL NTITPCAACK LLRRRCAQEC PFSPYFSPHE PHKFASVHKV FGASNVSKML MEVPESQRAD
101: AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS
201: CVFSQPTTRD LEYGNIESEN NYFG

Arabidopsis Description

LBD15LOB domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5T5]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.