Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043036_P001 | Maize | cytosol | 86.35 | 90.72 |
| Os01t0825000-01 | Rice | cytosol | 71.89 | 71.31 |
| TraesCS3D01G340000.1 | Wheat | cytosol | 70.68 | 70.97 |
| TraesCS3A01G346300.1 | Wheat | cytosol | 70.68 | 70.4 |
| GSMUA_Achr11P... | Banana | cytosol | 54.22 | 62.21 |
| VIT_13s0067g02380.t01 | Wine grape | nucleus | 53.82 | 59.82 |
| GSMUA_Achr5P07460_001 | Banana | nucleus | 50.2 | 59.81 |
| GSMUA_Achr7P22200_001 | Banana | nucleus | 50.6 | 59.72 |
| TraesCS3B01G378100.1 | Wheat | plastid | 68.67 | 58.56 |
| KRH53776 | Soybean | nucleus | 52.21 | 58.56 |
| GSMUA_AchrUn_... | Banana | plastid | 42.97 | 58.15 |
| KRH64170 | Soybean | nucleus | 51.0 | 57.21 |
| VIT_06s0004g07790.t01 | Wine grape | cytosol | 51.0 | 55.46 |
| Solyc06g050430.2.1 | Tomato | nucleus | 48.19 | 55.3 |
| HORVU3Hr1G088440.1 | Barley | plastid | 69.88 | 52.73 |
| Solyc06g082430.1.1 | Tomato | cytosol, nucleus, plastid | 47.79 | 51.29 |
| PGSC0003DMT400052995 | Potato | plastid | 41.37 | 51.24 |
| Solyc06g007390.2.1 | Tomato | nucleus | 47.39 | 49.58 |
| PGSC0003DMT400078265 | Potato | cytosol, nucleus, plastid | 44.18 | 49.55 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 47.79 | 47.79 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 47.79 | 47.04 |
| CDY02059 | Canola | mitochondrion | 41.77 | 44.07 |
| Bra018320.1-P | Field mustard | mitochondrion | 41.37 | 43.64 |
| CDY10726 | Canola | mitochondrion | 41.37 | 43.64 |
| OQU77508 | Sorghum | cytosol, nucleus, plastid | 53.01 | 43.0 |
| AT2G30340.2 | Thale cress | nucleus | 45.38 | 42.01 |
| EER93717 | Sorghum | plastid | 32.53 | 39.13 |
| PGSC0003DMT400074783 | Potato | mitochondrion | 41.77 | 37.96 |
| KXG22772 | Sorghum | plastid | 31.33 | 37.5 |
| EES07852 | Sorghum | plastid | 31.73 | 37.09 |
| EES18939 | Sorghum | plastid | 30.12 | 34.25 |
| EES19343 | Sorghum | mitochondrion | 28.92 | 33.18 |
| EER92422 | Sorghum | plastid | 27.31 | 28.94 |
| EES00235 | Sorghum | plastid | 29.32 | 27.24 |
| EER93817 | Sorghum | plastid | 28.11 | 23.57 |
| OQU78015 | Sorghum | plastid | 27.71 | 22.4 |
| OQU88012 | Sorghum | mitochondrion, vacuole | 27.71 | 20.78 |
Protein Annotations
| EnsemblPlants:OQU87769 | EnsemblPlantsGene:SORBI_3003G340100 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF20 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:OQU87769 | ProteinID:OQU87769.1 | SEG:seg |
| UniParc:UPI0009DC8FC6 | UniProt:A0A1W0W074 | MapMan:15.5.24 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:66301546..66304265
Molecular Weight (calculated)
26315.0 Da
IEP (calculated)
6.506
GRAVY (calculated)
-0.168
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTESRERVD EIGKKIKREP DTAALAVAVA SASTVPADNH IPHRLGLGLG GVLNTLTPCA ACKLLRRRCA QECPFAPYFS PHEPHKFAAV HKVFGASNVS
101: KLLLEVAEGE RADAASSLVY EANLRLRDPV YGCMGAISML QQQVNALEAE LEAVRAEILK HRYRQAGGGN RLIDDDAHAT ASFVAPASAP VHVNDVVSVV
201: EAGQEVAATG GGASGMSTSS AVYVAEAEQP ASTNHYSSRN PSEHPAYFG
101: KLLLEVAEGE RADAASSLVY EANLRLRDPV YGCMGAISML QQQVNALEAE LEAVRAEILK HRYRQAGGGN RLIDDDAHAT ASFVAPASAP VHVNDVVSVV
201: EAGQEVAATG GGASGMSTSS AVYVAEAEQP ASTNHYSSRN PSEHPAYFG
001: MSRERERFEE IGKKIKREAD AWPHQMAGIR RPMSGPPGTL NTITPCAACK LLRRRCAQEC PFSPYFSPHE PHKFASVHKV FGASNVSKML MEVPESQRAD
101: AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS
201: CVFSQPTTRD LEYGNIESEN NYFG
101: AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS
201: CVFSQPTTRD LEYGNIESEN NYFG
Arabidopsis Description
LBD15LOB domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5T5]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.