CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17149	Soybean	cytosol, mitochondrion, nucleus	92.09	93.57
KRH64170	Soybean	nucleus	61.26	69.82
KRH53776	Soybean	nucleus	61.26	69.82
VIT_06s0004g07790.t01	Wine grape	cytosol	60.87	67.25
CDY67958	Canola	plastid	52.57	67.17
CDY23903	Canola	plastid	52.17	66.67
Bra000188.1-P	Field mustard	plastid	51.78	65.83
PGSC0003DMT400078265	Potato	cytosol, nucleus, plastid	57.31	65.32
Solyc06g082430.1.1	Tomato	cytosol, nucleus, plastid	59.68	65.09
GSMUA_Achr11P...	Banana	cytosol	55.34	64.52
GSMUA_AchrUn_...	Banana	plastid	46.64	64.13
PGSC0003DMT400052995	Potato	plastid	50.59	63.68
CDY06988	Canola	plastid	50.2	63.18
Bra016992.1-P	Field mustard	plastid	50.2	63.18
GSMUA_Achr5P07460_001	Banana	nucleus	52.17	63.16
Bra004572.1-P	Field mustard	cytosol, mitochondrion, nucleus	55.34	62.78
AT2G40470.1	Thale cress	cytosol, nucleus, plastid	54.55	61.61
Solyc06g007390.2.1	Tomato	nucleus	57.31	60.92
CDX93178	Canola	cytosol, nucleus, plastid	54.15	60.35
CDY24903	Canola	mitochondrion	54.15	59.31
HORVU1Hr1G024490.1	Barley	cytosol, mitochondrion, nucleus	38.74	59.04
GSMUA_Achr7P22200_001	Banana	nucleus	48.62	58.29
CDY07604	Canola	mitochondrion	53.36	58.19
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	22.92	53.7
Zm00001d009823_P001	Maize	plastid	44.27	51.14
KRH14912	Soybean	nucleus	30.43	50.33
KRH50484	Soybean	cytosol, nucleus, plastid	31.62	50.31
TraesCS1D01G113100.1	Wheat	nucleus	46.64	50.21
Zm00001d043036_P001	Maize	cytosol	47.04	50.21
KRH73255	Soybean	mitochondrion, nucleus, plastid	30.43	50.0
Os05t0165450-00	Rice	extracellular	48.62	49.6
KRG89441	Soybean	cytosol, nucleus, plastid	32.02	49.39
TraesCS1B01G131900.2	Wheat	nucleus	46.25	49.37
TraesCS1A01G111700.1	Wheat	nucleus	45.85	48.95
OQU87769	Sorghum	cytosol	47.04	47.79
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	32.02	47.65
TraesCS3D01G340000.1	Wheat	cytosol	46.64	47.58
KRG97685	Soybean	mitochondrion, nucleus	30.83	47.27
KRG98217	Soybean	mitochondrion	32.02	47.09
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	31.62	47.06
Os01t0825000-01	Rice	cytosol	46.64	47.01
TraesCS3A01G346300.1	Wheat	cytosol	46.25	46.8
KRH43747	Soybean	mitochondrion	32.41	46.33
KRH30173	Soybean	mitochondrion, nucleus	31.23	45.93
KRH13706	Soybean	mitochondrion	32.02	45.51
KRH56556	Soybean	nucleus, plastid	30.04	44.71
KRG93235	Soybean	plastid	28.85	43.45
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.43	42.31
KRH07170	Soybean	plastid	30.04	42.22
OQU77508	Sorghum	cytosol, nucleus, plastid	49.41	40.72
KRH03242	Soybean	nucleus, plastid	30.04	40.21
TraesCS3B01G378100.1	Wheat	plastid	46.25	40.07
KRH10407	Soybean	mitochondrion	26.88	39.53
KRH63606	Soybean	plastid	28.06	39.01
KRH54338	Soybean	plastid	28.46	38.92
KRH57118	Soybean	plastid	29.64	38.07
HORVU3Hr1G088440.1	Barley	plastid	47.04	36.06
KRH24932	Soybean	nucleus, plastid	28.46	35.64
KRH22937	Soybean	plastid	27.27	34.85
KRG89044	Soybean	nucleus, plastid	27.67	34.31
KRG91848	Soybean	plastid	28.46	32.43
KRH34918	Soybean	plastid	28.06	31.98
KRH20638	Soybean	nucleus	26.88	31.78
KRH13283	Soybean	nucleus	26.48	31.6
KRH62409	Soybean	nucleus	26.09	31.13
KRG88909	Soybean	nucleus	25.3	29.91
KRH53127	Soybean	nucleus	22.53	27.94
KRH57745	Soybean	nucleus	26.88	24.64
KRH76950	Soybean	nucleus	27.67	23.03
KRH28509	Soybean	nucleus	27.27	22.4

Protein Annotations

EMBL:ACUP02001243	EnsemblPlants:KRH72805	EnsemblPlantsGene:GLYMA_02G234600	EntrezGene:100778248	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF28	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH72805
ProteinID:KRH72805.1	SEG:seg	UniParc:UPI0002962086	UniProt:K7KAB5	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr2:-:42199115..42200231

Molecular Weight (calculated)

27314.7 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.257

Length

253 amino acids

Sequence
(BLAST)

001: MFGHPETDRL DEIITKVRAE GEASCQMGRK HFYGPTPGTT LNTVTPCAAC KLLRRRCAEE CPFSPYFSPH EPQKFAAVHK VFGASNVSKM LMEVPEGQRA
101: DAANSLVYEA NLRIRDPVYG CMGAISALQQ QVQRLQVELN ATRAEILKYK YREAACIISS HHHVALVSSA DAISIAAIPA DSSQGLSQPQ IQPHPPPPPP
201: KPLPSPPPPK PLPSPSILLS SLSSSSASSV YTPPKSTMSL GSISTTENVP YFV

Best Arabidopsis Sequence Match ( AT2G30130.1 )
(BLAST)

001: MGGPGSSPCA SCKLLRRRCA KDCIFAPYFP PDDPHKFAIV HKVFGASNVS KMLQELPVHQ RADAVNSLVF EANARVRDPV YGCVGAISYL QNQVSQLQMQ
101: LAVAQAEILC IQMQNEPTLQ SHHQVLELDQ DHKALLLNNN NINNCNTNNN NNNFGYAMSS GQFNSNFASP SSIMQMQMQM QMQDPLKQES LWT

Arabidopsis Description

LBD12PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.