Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93235 | Soybean | plastid | 95.29 | 96.43 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 48.82 | 76.85 |
| Bra039072.1-P | Field mustard | plastid | 58.82 | 76.34 |
| KRH07170 | Soybean | plastid | 80.59 | 76.11 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 81.18 | 75.82 |
| CDY20041 | Canola | plastid | 58.24 | 75.57 |
| CDY49773 | Canola | plastid | 58.24 | 75.0 |
| Bra025294.1-P | Field mustard | plastid | 57.65 | 74.24 |
| CDY13730 | Canola | plastid | 57.65 | 74.24 |
| CDY03987 | Canola | plastid | 57.65 | 74.24 |
| CDX83724 | Canola | plastid | 57.65 | 74.24 |
| Bra033019.1-P | Field mustard | plastid | 57.65 | 74.24 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 73.53 | 73.53 |
| PGSC0003DMT400032875 | Potato | plastid | 66.47 | 71.97 |
| Solyc02g086480.1.1 | Tomato | plastid | 60.59 | 69.13 |
| Solyc02g067800.2.1 | Tomato | plastid | 65.29 | 66.07 |
| PGSC0003DMT400017805 | Potato | plastid | 64.71 | 65.48 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 58.24 | 62.26 |
| KRH54338 | Soybean | plastid | 64.12 | 58.92 |
| KRH63606 | Soybean | plastid | 62.35 | 58.24 |
| KRH03242 | Soybean | nucleus, plastid | 63.53 | 57.14 |
| KRH57118 | Soybean | plastid | 64.12 | 55.33 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 42.94 | 47.4 |
| KRG97685 | Soybean | mitochondrion, nucleus | 45.88 | 47.27 |
| KRH14912 | Soybean | nucleus | 42.35 | 47.06 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 42.94 | 45.91 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 42.94 | 44.51 |
| KRH20638 | Soybean | nucleus | 55.29 | 43.93 |
| Os01t0169400-01 | Rice | plastid | 64.12 | 43.43 |
| KRH13283 | Soybean | nucleus | 54.12 | 43.4 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 42.94 | 42.94 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 42.94 | 42.94 |
| KRG98217 | Soybean | mitochondrion | 42.94 | 42.44 |
| TraesCS3A01G093200.1 | Wheat | plastid | 64.12 | 42.41 |
| TraesCS3D01G093500.1 | Wheat | plastid | 63.53 | 42.02 |
| TraesCS3B01G108500.1 | Wheat | plastid | 63.53 | 42.02 |
| KRH30173 | Soybean | mitochondrion, nucleus | 42.35 | 41.86 |
| KRH13706 | Soybean | mitochondrion | 43.53 | 41.57 |
| KRH43747 | Soybean | mitochondrion | 42.94 | 41.24 |
| Zm00001d039694_P001 | Maize | plastid | 62.35 | 40.61 |
| EES00235 | Sorghum | plastid | 62.94 | 39.93 |
| HORVU3Hr1G016690.1 | Barley | plastid | 64.12 | 39.35 |
| KRG88909 | Soybean | nucleus | 47.65 | 37.85 |
| KRH10407 | Soybean | mitochondrion | 37.65 | 37.21 |
| KRH62409 | Soybean | nucleus | 45.29 | 36.32 |
| KRH53127 | Soybean | nucleus | 41.76 | 34.8 |
| KRG89044 | Soybean | nucleus, plastid | 40.59 | 33.82 |
| KRH24932 | Soybean | nucleus, plastid | 40.0 | 33.66 |
| KRH22937 | Soybean | plastid | 37.65 | 32.32 |
| KRH64170 | Soybean | nucleus | 41.76 | 31.98 |
| KRH53776 | Soybean | nucleus | 41.76 | 31.98 |
| KRH57745 | Soybean | nucleus | 48.82 | 30.07 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 44.71 | 30.04 |
| KRH34918 | Soybean | plastid | 37.65 | 28.83 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 41.76 | 28.51 |
| KRG91848 | Soybean | plastid | 37.06 | 28.38 |
| KRH76950 | Soybean | nucleus | 50.59 | 28.29 |
| KRH28509 | Soybean | nucleus | 51.18 | 28.25 |
Protein Annotations
| EMBL:ACUP02002783 | EnsemblPlants:KRH56556 | EnsemblPlantsGene:GLYMA_05G004400 | EntrezGene:100788656 | InterPro:IPR004883 | InterPro:LOB |
| ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH56555.1 |
| ProteinID:KRH56556 | ProteinID:KRH56556.1 | SEG:seg | UniParc:UPI00023C46AE | UniProt:K7KNN7 | MapMan:15.5.24 |
Description
hypothetical protein
Coordinates
chr5:-:366666..368637
Molecular Weight (calculated)
18637.8 Da
IEP (calculated)
7.468
GRAVY (calculated)
-0.578
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSYSNSP CAACKFLRRK CMPDCIFAPY FPPEEPHKFA NVHKIFGASN VSKLLNEVQP HQREDAVNSL AYEAEARIKD PVYGCVGAIS VLQKQVLRLQ
101: KELDATNADL IRYSACNEIP NTTTHHGGRR MSDDGGGGGS SLAHSHGFYY PSNWNNDPCG NSNGYPRGDI
101: KELDATNADL IRYSACNEIP NTTTHHGGRR MSDDGGGGGS SLAHSHGFYY PSNWNNDPCG NSNGYPRGDI
001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
Arabidopsis Description
LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.