Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00235 | Sorghum | plastid | 92.34 | 89.93 |
| Os01t0169400-01 | Rice | plastid | 80.46 | 83.67 |
| TraesCS3D01G093500.1 | Wheat | plastid | 75.48 | 76.65 |
| TraesCS3B01G108500.1 | Wheat | plastid | 75.1 | 76.26 |
| TraesCS3A01G093200.1 | Wheat | plastid | 75.1 | 76.26 |
| HORVU3Hr1G016690.1 | Barley | plastid | 75.48 | 71.12 |
| Bra039072.1-P | Field mustard | plastid | 33.33 | 66.41 |
| CDY20041 | Canola | plastid | 32.95 | 65.65 |
| Bra025294.1-P | Field mustard | plastid | 32.95 | 65.15 |
| CDY13730 | Canola | plastid | 32.95 | 65.15 |
| CDX83724 | Canola | plastid | 32.57 | 64.39 |
| CDY49773 | Canola | plastid | 32.57 | 64.39 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 26.44 | 63.89 |
| Solyc02g067800.2.1 | Tomato | plastid | 41.0 | 63.69 |
| PGSC0003DMT400017805 | Potato | plastid | 41.0 | 63.69 |
| CDY03987 | Canola | plastid | 32.18 | 63.64 |
| Bra033019.1-P | Field mustard | plastid | 32.18 | 63.64 |
| Solyc02g086480.1.1 | Tomato | plastid | 36.02 | 63.09 |
| PGSC0003DMT400032875 | Potato | plastid | 37.93 | 63.06 |
| KRH56556 | Soybean | nucleus, plastid | 40.61 | 62.35 |
| KRG93235 | Soybean | plastid | 39.85 | 61.9 |
| KRH54338 | Soybean | plastid | 43.3 | 61.08 |
| VIT_17s0000g09010.t01 | Wine grape | plastid | 42.53 | 60.33 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 39.08 | 60.0 |
| KRH63606 | Soybean | plastid | 41.76 | 59.89 |
| KRH03242 | Soybean | nucleus, plastid | 43.3 | 59.79 |
| CDY48125 | Canola | plastid | 39.85 | 59.09 |
| CDY16738 | Canola | plastid | 39.85 | 59.09 |
| KRH07170 | Soybean | plastid | 40.61 | 58.89 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 42.91 | 58.64 |
| PGSC0003DMT400069646 | Potato | plastid | 39.08 | 58.29 |
| CDY69697 | Canola | plastid | 40.23 | 58.01 |
| CDY68853 | Canola | plastid | 40.23 | 58.01 |
| Bra038606.1-P | Field mustard | plastid | 40.23 | 58.01 |
| KRG94119 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 40.23 | 57.69 |
| Bra035860.1-P | Field mustard | plastid | 38.7 | 57.39 |
| KRH57118 | Soybean | plastid | 43.3 | 57.36 |
| Solyc03g112430.1.1 | Tomato | nucleus, plastid | 42.15 | 56.12 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 33.33 | 54.72 |
| AT5G63090.3 | Thale cress | plastid | 38.7 | 54.3 |
| Solyc06g071660.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 37.93 | 48.77 |
| Zm00001d013625_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 31.03 | 40.7 |
| Zm00001d038013_P001 | Maize | mitochondrion | 27.2 | 36.41 |
| Zm00001d010978_P001 | Maize | plastid | 29.5 | 36.32 |
| Zm00001d033466_P001 | Maize | plastid | 28.74 | 35.55 |
| Zm00001d042560_P002 | Maize | plastid | 34.1 | 34.23 |
| Zm00001d035498_P001 | Maize | plastid | 28.74 | 33.94 |
| Zm00001d009823_P001 | Maize | plastid | 27.2 | 32.42 |
| Zm00001d010264_P001 | Maize | plastid | 32.18 | 30.43 |
| Zm00001d043036_P001 | Maize | cytosol | 26.82 | 29.54 |
| Zm00001d028721_P001 | Maize | plastid | 26.44 | 29.36 |
| Zm00001d047752_P001 | Maize | plastid | 26.44 | 28.87 |
| Zm00001d038197_P001 | Maize | plastid | 30.27 | 28.42 |
| Zm00001d033335_P001 | Maize | plastid | 29.89 | 27.76 |
| Zm00001d013732_P001 | Maize | plastid | 30.65 | 26.76 |
| Zm00001d047521_P001 | Maize | plastid | 23.75 | 26.27 |
Protein Annotations
| EMBL:BT035538 | EMBL:KJ727633 | EnsemblPlants:Zm00001d039694_P001 | EnsemblPlants:Zm00001d039694_T001 | EnsemblPlantsGene:Zm00001d039694 | EntrezGene:100193308 |
| InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF35 | PFAM:PF03195 |
| PFscan:PS50891 | ProteinID:ABC54560.1 | ProteinID:ONM29767.1 | SEG:seg | UniParc:UPI00006C9719 | UniProt:Q27YF3 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
ramosa2 ramosa2
Coordinates
chr3:+:12158280..12159065
Molecular Weight (calculated)
26782.8 Da
IEP (calculated)
7.798
GRAVY (calculated)
-0.011
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSSTSNN SAFSPVAASA GTTMPGAGAP CAACKFLRRK CLPGCVFAPY FPPEEPQKFA NVHKVFGASN VTKLLNELLP HQREDAVSSL AYEAEARVKD
101: PVYGCVGAIS VLQRQVHRLQ KELDAAHAEL LRYACGDVAA GIPTALPVVS AAPRLSTAPM TTTSPGQFAA GMYGSGRRLG VVDGLAAPPL PPSGGGGGCY
201: FMRNHHNNVV ISSSPGADVA PVLPYASVAN WAVNAISAST TTTSGSESIG LDHKEGGDSS M
101: PVYGCVGAIS VLQRQVHRLQ KELDAAHAEL LRYACGDVAA GIPTALPVVS AAPRLSTAPM TTTSPGQFAA GMYGSGRRLG VVDGLAAPPL PPSGGGGGCY
201: FMRNHHNNVV ISSSPGADVA PVLPYASVAN WAVNAISAST TTTSGSESIG LDHKEGGDSS M
001: MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
101: QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Arabidopsis Description
LOBLOB [Source:UniProtKB/TrEMBL;Acc:A0A178UKE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.