Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH07170 | Soybean | plastid | 89.56 | 90.56 |
| KRG93235 | Soybean | plastid | 75.27 | 81.55 |
| KRH56556 | Soybean | nucleus, plastid | 75.82 | 81.18 |
| KRH76093 | Soybean | cytosol, endoplasmic reticulum, nucleus | 46.7 | 78.7 |
| VIT_14s0066g00680.t01 | Wine grape | nucleus, plastid | 70.33 | 75.29 |
| Bra039072.1-P | Field mustard | plastid | 53.85 | 74.81 |
| CDY20041 | Canola | plastid | 53.3 | 74.05 |
| CDY49773 | Canola | plastid | 53.3 | 73.48 |
| PGSC0003DMT400032875 | Potato | plastid | 63.19 | 73.25 |
| Bra025294.1-P | Field mustard | plastid | 52.75 | 72.73 |
| CDY13730 | Canola | plastid | 52.75 | 72.73 |
| Bra033019.1-P | Field mustard | plastid | 52.75 | 72.73 |
| CDY03987 | Canola | plastid | 52.75 | 72.73 |
| CDX83724 | Canola | plastid | 52.75 | 72.73 |
| Solyc02g086480.1.1 | Tomato | plastid | 59.34 | 72.48 |
| Solyc02g067800.2.1 | Tomato | plastid | 59.89 | 64.88 |
| PGSC0003DMT400017805 | Potato | plastid | 59.89 | 64.88 |
| AT3G27650.1 | Thale cress | cytosol, nucleus, plastid | 53.85 | 61.64 |
| KRH54338 | Soybean | plastid | 59.89 | 58.92 |
| KRH63606 | Soybean | plastid | 58.79 | 58.79 |
| KRH03242 | Soybean | nucleus, plastid | 59.34 | 57.14 |
| KRH57118 | Soybean | plastid | 58.79 | 54.31 |
| KRH73255 | Soybean | mitochondrion, nucleus, plastid | 40.11 | 47.4 |
| KRH14912 | Soybean | nucleus | 39.56 | 47.06 |
| KRH50484 | Soybean | cytosol, nucleus, plastid | 39.56 | 45.28 |
| KRG97685 | Soybean | mitochondrion, nucleus | 40.66 | 44.85 |
| KRG89441 | Soybean | cytosol, nucleus, plastid | 39.56 | 43.9 |
| Os01t0169400-01 | Rice | plastid | 58.79 | 42.63 |
| KRH13283 | Soybean | nucleus | 49.45 | 42.45 |
| KRH20638 | Soybean | nucleus | 49.45 | 42.06 |
| KRH11753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 39.01 | 41.76 |
| KRH36753 | Soybean | cytosol, mitochondrion, nucleus, plastid | 39.01 | 41.76 |
| KRH13706 | Soybean | mitochondrion | 40.11 | 41.01 |
| TraesCS3A01G093200.1 | Wheat | plastid | 57.69 | 40.86 |
| TraesCS3D01G093500.1 | Wheat | plastid | 57.69 | 40.86 |
| KRH43747 | Soybean | mitochondrion | 39.56 | 40.68 |
| TraesCS3B01G108500.1 | Wheat | plastid | 57.14 | 40.47 |
| Zm00001d039694_P001 | Maize | plastid | 57.69 | 40.23 |
| KRG98217 | Soybean | mitochondrion | 37.91 | 40.12 |
| KRH30173 | Soybean | mitochondrion, nucleus | 37.91 | 40.12 |
| EES00235 | Sorghum | plastid | 58.24 | 39.55 |
| HORVU3Hr1G016690.1 | Barley | plastid | 58.79 | 38.63 |
| KRG88909 | Soybean | nucleus | 43.96 | 37.38 |
| KRH62409 | Soybean | nucleus | 42.31 | 36.32 |
| KRH10407 | Soybean | mitochondrion | 33.52 | 35.47 |
| KRH53127 | Soybean | nucleus | 39.01 | 34.8 |
| KRH64170 | Soybean | nucleus | 39.56 | 32.43 |
| KRH53776 | Soybean | nucleus | 39.56 | 32.43 |
| KRG89044 | Soybean | nucleus, plastid | 36.26 | 32.35 |
| KRH24932 | Soybean | nucleus, plastid | 35.71 | 32.18 |
| KRH22937 | Soybean | plastid | 33.52 | 30.81 |
| KRH72805 | Soybean | cytosol, mitochondrion, nucleus | 42.31 | 30.43 |
| KRH17149 | Soybean | cytosol, mitochondrion, nucleus | 40.11 | 29.32 |
| KRH57745 | Soybean | nucleus | 42.86 | 28.26 |
| KRH76950 | Soybean | nucleus | 45.6 | 27.3 |
| KRH34918 | Soybean | plastid | 32.97 | 27.03 |
| KRH28509 | Soybean | nucleus | 45.6 | 26.95 |
| KRG91848 | Soybean | plastid | 32.42 | 26.58 |
Protein Annotations
| EMBL:ACUP02011731 | EnsemblPlants:KRG94119 | EnsemblPlantsGene:GLYMA_19G063600 | EntrezGene:100306630 | InterPro:IPR004883 | InterPro:LOB |
| ncoils:Coil | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF12 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRG94119 |
| ProteinID:KRG94119.1 | SEG:seg | UniParc:UPI000295E3D4 | UniProt:K7MWX0 | MapMan:15.5.24 | : |
Description
hypothetical protein
Coordinates
chr19:-:14054218..14055263
Molecular Weight (calculated)
20120.8 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.493
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPKKEVAG CVLEKIMASS SYSNSPCAAC KFLRRKCMPD CIFSPYFPPE EPQKFANVHK IFGASNVSKL LNEVQPHQRE DAVNSLAYEA EARIKDPVYG
101: CVGAISVLQR QVIRLQKELD ATNADLIRYT CNEMPTTQDG RRIIGEGDGD GGSSLGQSPG YYYPSPWNND PLGDGYHRGD NI
101: CVGAISVLQR QVIRLQKELD ATNADLIRYT CNEMPTTQDG RRIIGEGDGD GGSSLGQSPG YYYPSPWNND PLGDGYHRGD NI
001: MPKRETKKIK PSQEVIKEGP FLVAIHLKGI YMSNYTNSPC AACKFLRRKC TSDCVFAPYF PPEEPTKFAN VHRIFGASNV SKILHEVAPH QREDAVNSLA
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
101: YEAEARLKDP VYGCVGAISV LQRQVLRLQR ELEETNADLM RYAGCLGGET TSAYGGRRG
Arabidopsis Description
LBD25LOB domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q3]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.