CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20638	Soybean	nucleus	93.4	92.52
Solyc03g063140.2.1	Tomato	nucleus, plastid	56.6	68.97
PGSC0003DMT400002549	Potato	plastid	57.08	64.02
KRH76093	Soybean	cytosol, endoplasmic reticulum, nucleus	31.13	61.11
Solyc11g008830.1.1	Tomato	plastid	62.26	57.39
KRH56556	Soybean	nucleus, plastid	43.4	54.12
KRG93235	Soybean	plastid	41.98	52.98
KRH03242	Soybean	nucleus, plastid	46.23	51.85
KRH54338	Soybean	plastid	44.34	50.81
KRH07170	Soybean	plastid	42.92	50.56
KRH63606	Soybean	plastid	43.4	50.55
KRG94119	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	42.45	49.45
KRH57118	Soybean	plastid	45.75	49.24
KRH14912	Soybean	nucleus	33.96	47.06
KRH73255	Soybean	mitochondrion, nucleus, plastid	33.96	46.75
KRG88909	Soybean	nucleus	46.7	46.26
KRH50484	Soybean	cytosol, nucleus, plastid	33.96	45.28
KRG97685	Soybean	mitochondrion, nucleus	34.91	44.85
KRG89441	Soybean	cytosol, nucleus, plastid	33.49	43.29
KRH36753	Soybean	cytosol, mitochondrion, nucleus, plastid	34.43	42.94
KRG98217	Soybean	mitochondrion	34.43	42.44
KRH11753	Soybean	cytosol, mitochondrion, nucleus, plastid	33.96	42.35
KRH30173	Soybean	mitochondrion, nucleus	33.96	41.86
KRH62409	Soybean	nucleus	41.04	41.04
KRH53127	Soybean	nucleus	39.15	40.69
KRH13706	Soybean	mitochondrion	33.49	39.89
TraesCS1B01G270400.1	Wheat	plastid	48.58	39.16
TraesCS1D01G259900.1	Wheat	plastid	48.58	39.16
TraesCS1A01G260000.1	Wheat	plastid	48.58	39.02
KRH43747	Soybean	mitochondrion	32.55	38.98
TraesCS3D01G397200.1	Wheat	plastid	46.23	37.84
TraesCS3A01G402300.1	Wheat	plastid	46.23	37.84
Os05t0417000-00	Rice	plastid	49.53	37.63
TraesCS3B01G435700.1	Wheat	plastid	45.75	37.45
HORVU1Hr1G064640.3	Barley	plastid	49.06	37.41
Zm00001d042560_P002	Maize	plastid	45.75	37.31
Os01t0889400-02	Rice	plastid	46.7	36.8
KRH10407	Soybean	mitochondrion	29.25	36.05
HORVU3Hr1G090240.2	Barley	plastid	44.34	34.81
HORVU3Hr1G090250.5	Barley	plastid	44.34	34.81
KRG89044	Soybean	nucleus, plastid	32.08	33.33
KRH24932	Soybean	nucleus, plastid	31.6	33.17
KRH57745	Soybean	nucleus	41.98	32.25
KRH22937	Soybean	plastid	29.72	31.82
OQU78015	Sorghum	plastid	45.75	31.49
Zm00001d038197_P001	Maize	plastid	40.57	30.94
Zm00001d010264_P001	Maize	plastid	39.62	30.43
KRH76950	Soybean	nucleus	42.92	29.93
OQU88012	Sorghum	mitochondrion, vacuole	46.7	29.82
KRH53776	Soybean	nucleus	31.13	29.73
KRH28509	Soybean	nucleus	42.92	29.55
KRH64170	Soybean	nucleus	30.66	29.28
KRH34918	Soybean	plastid	30.19	28.83
KRG91848	Soybean	plastid	29.72	28.38
KRH17149	Soybean	cytosol, mitochondrion, nucleus	32.08	27.31
Zm00001d047521_P001	Maize	plastid	30.19	27.12
KRH72805	Soybean	cytosol, mitochondrion, nucleus	31.6	26.48

Protein Annotations

EMBL:ACUP02009681	EnsemblPlants:KRH13283	EnsemblPlantsGene:GLYMA_15G228100	EntrezGene:100806890	InterPro:IPR004883	InterPro:LOB
PANTHER:PTHR31301	PANTHER:PTHR31301:SF5	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH13283	ProteinID:KRH13283.1
SEG:seg	UniParc:UPI000233B9E9	UniProt:K7MD92	MapMan:15.5.24	:	:

Description

hypothetical protein

Coordinates

chr15:+:42197883..42199624

Molecular Weight (calculated)

23852.7 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.728

Length

212 amino acids

Sequence
(BLAST)

001: MASSNSPCAA CKFLRRKCQP ECAFAPYFPP DQPQKFANVH RIFGASNVTK LLNDLHPHQR EDAVNSLAYE AEMRLRDPVY GCVGVISLLQ HQLRQLQMDL
101: YCAKSELSRY QNLSTTTNLS SLASESTATT YHHHQNTSGG GGFSRDHHYH YHHHHQFFPR DQHQQQQVVK SFDAGNNYDA SLLAMNISAS LGQLNQLQHQ
201: SATGGGDDRN RS

Best Arabidopsis Sequence Match ( AT1G65620.2 )
(BLAST)

001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS

Arabidopsis Description

AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.