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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G397200.1 Wheat plastid 98.07 98.07
TraesCS3A01G402300.1 Wheat plastid 98.07 98.07
Os01t0889400-02 Rice plastid 81.47 78.44
Zm00001d042560_P002 Maize plastid 75.68 75.38
TraesCS1B01G270400.1 Wheat plastid 70.27 69.2
OQU88012 Sorghum mitochondrion, vacuole 76.83 59.94
HORVU3Hr1G090240.2 Barley plastid 61.39 58.89
HORVU3Hr1G090250.5 Barley plastid 61.39 58.89
Solyc03g063140.2.1 Tomato nucleus, plastid 38.22 56.9
PGSC0003DMT400002549 Potato plastid 38.61 52.91
AT1G65620.1 Thale cress plastid 40.54 52.76
Bra039733.1-P Field mustard nucleus, plastid 40.54 51.98
CDY46781 Canola nucleus, plastid 40.54 51.98
CDY16414 Canola nucleus, plastid 40.54 51.98
VIT_00s0340g00090.t01 Wine grape nucleus 39.77 47.69
KRH20638 Soybean nucleus 37.84 45.79
KRH13283 Soybean nucleus 37.45 45.75
Solyc11g008830.1.1 Tomato plastid 40.15 45.22
KRG88909 Soybean nucleus 35.52 42.99
TraesCS5B01G150800.1 Wheat plastid 27.8 40.68
TraesCS1B01G235700.1 Wheat mitochondrion 28.19 38.62
TraesCS4B01G016200.1 Wheat plastid 25.1 37.14
TraesCS3B01G108500.1 Wheat plastid 35.14 35.41
TraesCS4B01G079900.1 Wheat mitochondrion, nucleus, plastid 33.59 30.63
TraesCS1B01G080600.1 Wheat cytosol, plastid 25.1 30.23
TraesCS4B01G197100.1 Wheat plastid 25.87 30.04
TraesCS1B01G131900.2 Wheat nucleus 27.03 29.54
TraesCS3B01G378100.1 Wheat plastid 25.1 22.26
Protein Annotations
EnsemblPlants:TraesCS3B01G435700.1EnsemblPlantsGene:TraesCS3B01G435700InterPro:IPR004883InterPro:LOBncoils:CoilPANTHER:PTHR31301
PANTHER:PTHR31301:SF33PFAM:PF03195PFscan:PS50891SEG:segMapMan:15.5.24:
Description
No Description!
Coordinates
chr3B:-:674062588..674063482
Molecular Weight (calculated)
26560.5 Da
IEP (calculated)
8.119
GRAVY (calculated)
-0.009
Length
259 amino acids
Sequence
(BLAST)
001: MASSSASSLP APGGSVITLA VSSAGGNGAG GVCGTGSPCA ACKFLRRKCQ PDCVFAPYFP PDNPQKFVHV HRVFGASNVT KLLNELHPYQ REDAVNSLAY
101: EADMRLRDPV YGCVAVISIL QRNLRQLQQD LARAKYELSK YQSAAGPNGS QAMAEFIGSA VPNGVASFIN VGHSAALGSV GGVTGFGQDH QFAAVQMLSR
201: SYEVAEPIAR LGLNGGYEFG YSAAGMAGAG SVPGLGMLGG SPFLKPGIAG SDERGGAGQ
Best Arabidopsis Sequence Match ( AT1G65620.2 )
(BLAST)
001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
Arabidopsis Description
AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.