Factsheet for TraesCS7B01G195100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G228900.1	Wheat	cytosol, nucleus, plastid	91.7	91.7
TraesCS7D01G229900.1	Wheat	cytosol, nucleus, plastid	90.83	90.83
HORVU7Hr1G046690.1	Barley	cytosol, nucleus, plastid	78.6	78.95
HORVU0Hr1G020290.1	Barley	cytosol, plastid	41.05	75.2
VIT_15s0048g00840.t01	Wine grape	cytosol, nucleus, plastid	38.43	45.36
Solyc01g091400.2.1	Tomato	plastid	32.31	44.31
Bra040312.1-P	Field mustard	cytosol, nucleus, plastid	32.31	44.05
AT2G45410.1	Thale cress	cytosol, nucleus, plastid	34.93	41.88
CDY37038	Canola	mitochondrion	32.31	41.57
CDY57108	Canola	mitochondrion	32.31	41.57
Bra004908.1-P	Field mustard	cytosol, nucleus, plastid	34.06	41.49
CDX74738	Canola	cytosol, nucleus, plastid	34.06	41.49
CDY68561	Canola	cytosol, nucleus, plastid	33.62	40.96
KRH76281	Soybean	cytosol, nucleus, plastid	34.93	40.4
AT4G00210.1	Thale cress	nucleus	38.43	40.0
TraesCS4B01G224600.1	Wheat	plastid	44.98	39.31
KRH65255	Soybean	cytosol, nucleus, plastid	36.24	39.15
PGSC0003DMT400033221	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	22.71	39.1
CDY07237	Canola	nucleus	31.44	37.31
CDY67746	Canola	nucleus	34.5	35.59
Bra037322.1-P	Field mustard	nucleus	34.5	35.59
TraesCS4B01G316100.1	Wheat	plastid	28.38	34.76
TraesCS6B01G438700.1	Wheat	plastid	29.26	31.75
TraesCS4B01G001200.1	Wheat	nucleus	30.13	28.87
TraesCS6B01G072200.1	Wheat	nucleus	29.69	28.69
TraesCS4B01G346500.1	Wheat	cytosol, mitochondrion, nucleus	20.96	28.57
TraesCS4B01G316200.1	Wheat	nucleus, plastid	35.81	28.47
TraesCS5B01G282700.1	Wheat	nucleus	21.83	26.32

Protein Annotations

EnsemblPlants:TraesCS7B01G195100.1	EnsemblPlantsGene:TraesCS7B01G195100	InterPro:IPR004883	InterPro:LOB	ncoils:Coil	PANTHER:PTHR31529
PANTHER:PTHR31529:SF3	PFAM:PF03195	PFscan:PS50891	SEG:seg	MapMan:15.5.24	:

Description

No Description!

Coordinates

chr7B:+:335444534..335445928

Molecular Weight (calculated)

24572.0 Da

IEP (calculated)

6.496

GRAVY (calculated)

-0.278

Length

229 amino acids

Sequence
(BLAST)

001: MSGSLTSASV SIGGRPIGSS GGPCGACKFL RRKCADDCIF APYFGSEKGV EHFTAVHKVF GASNVSKILN QAPPHKRLDA AITICYEAKA RLRDPIYGCV
101: GDILALQQRV ANLHAEVAFL QAHLTTLQQP SPPPFPSPPC MAMTTEFSIS ELASLSNVPN TMELSSLFDP SMQWAFQQQH QQPYDQTGEG SVGIGNTNSN
201: GDDLQALARE LLDRQSTGST PQQPSNTQF

Best Arabidopsis Sequence Match ( AT2G45420.1 )
(BLAST)

001: MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR

Arabidopsis Description

LBD18LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.