Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G046690.1 | Barley | cytosol, nucleus, plastid | 92.0 | 50.44 |
| TraesCS7A01G228900.1 | Wheat | cytosol, nucleus, plastid | 78.4 | 42.79 |
| TraesCS7D01G229900.1 | Wheat | cytosol, nucleus, plastid | 76.0 | 41.48 |
| TraesCS7B01G195100.1 | Wheat | cytosol, nucleus, plastid | 75.2 | 41.05 |
| Solyc01g091400.2.1 | Tomato | plastid | 52.0 | 38.92 |
| VIT_15s0048g00840.t01 | Wine grape | cytosol, nucleus, plastid | 59.2 | 38.14 |
| Bra040312.1-P | Field mustard | cytosol, nucleus, plastid | 49.6 | 36.9 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 57.6 | 36.36 |
| CDY37038 | Canola | mitochondrion | 49.6 | 34.83 |
| CDY57108 | Canola | mitochondrion | 49.6 | 34.83 |
| AT2G45410.1 | Thale cress | cytosol, nucleus, plastid | 51.2 | 33.51 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 56.8 | 33.49 |
| CDY07237 | Canola | nucleus | 51.2 | 33.16 |
| CDY68561 | Canola | cytosol, nucleus, plastid | 49.6 | 32.98 |
| HORVU4Hr1G080150.1 | Barley | plastid | 48.0 | 32.61 |
| CDX74738 | Canola | cytosol, nucleus, plastid | 48.8 | 32.45 |
| Bra004908.1-P | Field mustard | cytosol, nucleus, plastid | 48.8 | 32.45 |
| PGSC0003DMT400033221 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 34.4 | 32.33 |
| AT4G00210.1 | Thale cress | nucleus | 56.8 | 32.27 |
| HORVU5Hr1G075950.1 | Barley | cytosol, nucleus | 22.4 | 32.18 |
| HORVU4Hr1G063160.1 | Barley | plastid | 64.0 | 31.25 |
| HORVU0Hr1G017670.2 | Barley | plastid | 49.6 | 29.52 |
| CDY67746 | Canola | nucleus | 51.2 | 28.83 |
| Bra037322.1-P | Field mustard | nucleus | 51.2 | 28.83 |
| HORVU4Hr1G000880.4 | Barley | cytosol, nucleus, plastid | 51.2 | 28.44 |
| HORVU4Hr1G084750.2 | Barley | cytosol, nucleus | 36.0 | 25.42 |
| HORVU3Hr1G075370.2 | Barley | nucleus | 45.6 | 24.46 |
| HORVU4Hr1G080160.1 | Barley | plastid | 54.4 | 23.94 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G020290.1 | EnsemblPlantsGene:HORVU0Hr1G020290 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31529 | PANTHER:PTHR31529:SF3 |
| PFAM:PF03195 | PFscan:PS50891 | SEG:seg | UniParc:UPI000B47519A | UniProt:A0A287E5W5 | MapMan:15.5.24 |
Description
No Description!
Coordinates
chrchrUn:-:106732901..106733533
Molecular Weight (calculated)
13723.4 Da
IEP (calculated)
8.369
GRAVY (calculated)
0.022
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: RMSGSSTSVG VGVGAMLSGS SGGPCGACKF LRRKCTDDCI FAPYFDSDQG VEHFTAVHKV FGASNVSKLL NQTPPQKRLD AAITICYEAK ARLRDPAYGC
101: VADIFALQQQ IYNYFLHLFF LHAWY
101: VADIFALQQQ IYNYFLHLFF LHAWY
001: MSGSTTGCGG PCGACKFLRR KCVADCVFAP YFDSVEGTSH FTAVHKVFGA SNASKLLMMI PASRRLDAVV TLTYEALARL RDPVYGCVGH IFALQHQVMN
101: LQAELAYVQT QLSTLQGLPP PNSQNNSRTE AASSSNVPLI SSVDSKDNMS SSSSHIPCMS QQQEQEQPKE AIEVPTESVD LSTFFGLENP VDEDGDLNAL
201: AREFFTKYLT GGKYRPSSLI
101: LQAELAYVQT QLSTLQGLPP PNSQNNSRTE AASSSNVPLI SSVDSKDNMS SSSSHIPCMS QQQEQEQPKE AIEVPTESVD LSTFFGLENP VDEDGDLNAL
201: AREFFTKYLT GGKYRPSSLI
Arabidopsis Description
LBD31LOB domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:O81322]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.