Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37038 | Canola | mitochondrion | 97.75 | 97.75 |
| Bra040312.1-P | Field mustard | cytosol, nucleus, plastid | 91.57 | 97.02 |
| CDX74738 | Canola | cytosol, nucleus, plastid | 77.53 | 73.4 |
| CDY68561 | Canola | cytosol, nucleus, plastid | 76.4 | 72.34 |
| AT2G45410.1 | Thale cress | cytosol, nucleus, plastid | 76.97 | 71.73 |
| CDY35378 | Canola | cytosol, nucleus, plastid | 35.96 | 62.14 |
| Solyc01g091400.2.1 | Tomato | plastid | 47.19 | 50.3 |
| VIT_15s0048g00840.t01 | Wine grape | cytosol, nucleus, plastid | 54.49 | 50.0 |
| HORVU0Hr1G020290.1 | Barley | cytosol, plastid | 34.83 | 49.6 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 55.06 | 49.49 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 53.93 | 45.28 |
| PGSC0003DMT400033221 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 33.71 | 45.11 |
| CDX75748 | Canola | cytosol, mitochondrion, nucleus | 29.21 | 43.33 |
| CDY07237 | Canola | nucleus | 46.63 | 43.01 |
| CDX83633 | Canola | cytosol, mitochondrion, nucleus, plastid | 28.09 | 42.73 |
| CDX82498 | Canola | cytosol, nucleus, plastid | 28.65 | 42.15 |
| CDY13647 | Canola | cytosol, mitochondrion, nucleus, plastid | 28.65 | 42.15 |
| CDY28537 | Canola | mitochondrion | 27.53 | 40.5 |
| CDY48982 | Canola | mitochondrion | 26.97 | 39.67 |
| CDY15375 | Canola | nucleus | 39.33 | 38.89 |
| CDY67746 | Canola | nucleus | 47.19 | 37.84 |
| CDY10793 | Canola | nucleus | 38.2 | 37.78 |
| CDY24760 | Canola | nucleus | 37.64 | 37.22 |
| CDY60434 | Canola | nucleus | 37.64 | 36.61 |
| CDX98901 | Canola | nucleus | 37.64 | 36.61 |
| CDY14832 | Canola | mitochondrion, nucleus | 39.33 | 35.18 |
| CDY07236 | Canola | plastid | 43.26 | 34.38 |
| TraesCS7A01G228900.1 | Wheat | cytosol, nucleus, plastid | 43.82 | 34.06 |
| CDY18932 | Canola | plastid | 47.19 | 33.47 |
| CDY57109 | Canola | plastid | 48.88 | 33.46 |
| CDY68635 | Canola | nucleus | 48.31 | 33.2 |
| TraesCS7D01G229900.1 | Wheat | cytosol, nucleus, plastid | 42.7 | 33.19 |
| CDY54923 | Canola | cytosol, nucleus, plastid | 41.57 | 33.04 |
| CDY69735 | Canola | cytosol, nucleus, plastid | 41.57 | 33.04 |
| HORVU7Hr1G046690.1 | Barley | cytosol, nucleus, plastid | 42.13 | 32.89 |
| TraesCS7B01G195100.1 | Wheat | cytosol, nucleus, plastid | 41.57 | 32.31 |
| CDX88974 | Canola | mitochondrion, nucleus | 38.2 | 31.05 |
| CDY00547 | Canola | mitochondrion, nucleus | 37.64 | 30.88 |
| CDX71962 | Canola | plastid | 38.2 | 30.77 |
| CDY06048 | Canola | plastid | 38.2 | 30.22 |
| CDY00994 | Canola | plastid | 28.09 | 29.24 |
| CDY08551 | Canola | plastid | 28.09 | 29.07 |
| CDY22562 | Canola | nucleus | 38.76 | 28.99 |
| CDY64515 | Canola | nucleus, plastid | 39.33 | 28.69 |
| CDY47969 | Canola | nucleus | 39.33 | 28.46 |
| CDY14831 | Canola | nucleus | 39.33 | 28.46 |
| CDY70198 | Canola | nucleus | 38.76 | 28.28 |
| CDY19098 | Canola | cytosol | 37.64 | 28.03 |
| CDY47970 | Canola | nucleus | 39.89 | 26.89 |
| CDY29956 | Canola | plastid | 38.2 | 24.73 |
| CDX92049 | Canola | plastid | 37.08 | 24.72 |
| CDX74209 | Canola | plastid | 37.64 | 24.54 |
Protein Annotations
| EnsemblPlants:CDY57108 | EnsemblPlantsGene:GSBRNA2T00020558001 | InterPro:IPR004883 | InterPro:LOB | ncoils:Coil | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF7 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDY57108 | ProteinID:CDY57108.1 | SEG:seg |
| UniParc:UPI0004EE45DF | UniProt:A0A078J3M7 | MapMan:15.5.24 | : | : | : |
Description
BnaC04g56950DBnaC04g56950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3M7]
Coordinates
chrLK033547:-:40170..40849
Molecular Weight (calculated)
19920.3 Da
IEP (calculated)
8.736
GRAVY (calculated)
-0.147
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MTILVHRLRY MMTTNLNGGG RGGGGEGPCG ACKFLRRKCV RGCVFAPYFD AEQGTASFAA IHKVFGASNT SKMLLRLPLH KRLDAVATLG YEALARVRDP
101: VYGCVGHLFS LQHQVMNLQA EIAHVQARLS MFQRLSLVPP QQMQQPPFDL AYNNEYPMEP TNLDVVWEEE QLPQTVRL
101: VYGCVGHLFS LQHQVMNLQA EIAHVQARLS MFQRLSLVPP QQMQQPPFDL AYNNEYPMEP TNLDVVWEEE QLPQTVRL
001: MMTGNLNGGG RGGEGPCGAC KFLRRKCVKG CVFAPYFDAE QGTARFAAVH KVFGASNASK MLLRLPLHKR LDAVVTLCYE AMARIRDPVY GSVGHLFSLQ
101: HQVMNLQAEL AHVQARLSTI QRFPLQSPQQ MQPPSFDPAH NNEYAMEPSN LDSVWGEEHL LQDGTGDGDF QELASQFVSR YLPAVKLPAC T
101: HQVMNLQAEL AHVQARLSTI QRFPLQSPQQ MQPPSFDPAH NNEYAMEPSN LDSVWGEEHL LQDGTGDGDF QELASQFVSR YLPAVKLPAC T
Arabidopsis Description
LBD19LBD19 [Source:UniProtKB/TrEMBL;Acc:A0A178VSY1]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.