Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19529 | Soybean | plastid | 76.7 | 65.29 |
| CDY22562 | Canola | nucleus | 98.06 | 42.44 |
| VIT_07s0005g03030.t01 | Wine grape | plastid | 76.7 | 40.51 |
| EER95498 | Sorghum | cytosol, nucleus, plastid | 66.02 | 40.48 |
| GSMUA_Achr1P01350_001 | Banana | nucleus | 78.64 | 40.3 |
| Zm00001d027678_P001 | Maize | cytosol, nucleus, plastid | 65.05 | 40.12 |
| GSMUA_Achr5P13230_001 | Banana | mitochondrion, plastid | 74.76 | 39.9 |
| CDY64515 | Canola | nucleus, plastid | 94.17 | 39.75 |
| CDY70198 | Canola | nucleus | 93.2 | 39.34 |
| AT2G42430.1 | Thale cress | plastid | 93.2 | 39.18 |
| CDX75748 | Canola | cytosol, mitochondrion, nucleus | 45.63 | 39.17 |
| CDY47969 | Canola | nucleus | 93.2 | 39.02 |
| CDY14831 | Canola | nucleus | 92.23 | 38.62 |
| CDX83633 | Canola | cytosol, mitochondrion, nucleus, plastid | 43.69 | 38.46 |
| CDY24760 | Canola | nucleus | 66.99 | 38.33 |
| CDY10793 | Canola | nucleus | 66.99 | 38.33 |
| CDY15375 | Canola | nucleus | 66.99 | 38.33 |
| PGSC0003DMT400051680 | Potato | nucleus | 71.84 | 37.95 |
| Solyc06g083930.1.1 | Tomato | nucleus | 71.84 | 37.76 |
| KRH32155 | Soybean | plastid | 77.67 | 37.56 |
| HORVU4Hr1G080150.1 | Barley | plastid | 66.99 | 37.5 |
| TraesCS4A01G415300.1 | Wheat | plastid | 66.99 | 37.3 |
| CDX82498 | Canola | cytosol, nucleus, plastid | 43.69 | 37.19 |
| CDY13647 | Canola | cytosol, mitochondrion, nucleus, plastid | 43.69 | 37.19 |
| TraesCS4D01G312700.1 | Wheat | plastid | 66.99 | 36.9 |
| PGSC0003DMT400025135 | Potato | nucleus | 78.64 | 36.65 |
| CDY28537 | Canola | mitochondrion | 42.72 | 36.36 |
| TraesCS4B01G316100.1 | Wheat | plastid | 66.02 | 36.36 |
| Os03t0149000-01 | Rice | plastid | 65.05 | 36.22 |
| CDY60434 | Canola | nucleus | 64.08 | 36.07 |
| CDY37038 | Canola | mitochondrion | 62.14 | 35.96 |
| CDY57108 | Canola | mitochondrion | 62.14 | 35.96 |
| CDY14832 | Canola | mitochondrion, nucleus | 68.93 | 35.68 |
| CDY48982 | Canola | mitochondrion | 41.75 | 35.54 |
| CDX98901 | Canola | nucleus | 63.11 | 35.52 |
| HORVU0Hr1G017670.2 | Barley | plastid | 71.84 | 35.24 |
| Solyc09g066260.2.1 | Tomato | nucleus | 78.64 | 35.22 |
| Os02t0820500-01 | Rice | plastid | 73.79 | 35.19 |
| TraesCS6B01G438700.1 | Wheat | plastid | 71.84 | 35.07 |
| EES07771 | Sorghum | plastid | 72.82 | 34.88 |
| Zm00001d051891_P001 | Maize | plastid | 72.82 | 34.72 |
| TraesCS6A01G398400.1 | Wheat | plastid | 68.93 | 34.47 |
| TraesCS6D01G382600.1 | Wheat | plastid | 69.9 | 34.45 |
| CDY07237 | Canola | nucleus | 64.08 | 34.2 |
| CDX74738 | Canola | cytosol, nucleus, plastid | 61.16 | 33.51 |
| CDY68561 | Canola | cytosol, nucleus, plastid | 61.16 | 33.51 |
| CDX88974 | Canola | mitochondrion, nucleus | 69.9 | 32.88 |
| CDY00547 | Canola | mitochondrion, nucleus | 67.96 | 32.26 |
| CDY07236 | Canola | plastid | 69.9 | 32.14 |
| CDX71962 | Canola | plastid | 68.93 | 32.13 |
| CDY06048 | Canola | plastid | 68.93 | 31.56 |
| CDY54923 | Canola | cytosol, nucleus, plastid | 66.99 | 30.8 |
| CDY69735 | Canola | cytosol, nucleus, plastid | 66.99 | 30.8 |
| CDY00994 | Canola | plastid | 50.49 | 30.41 |
| CDY08551 | Canola | plastid | 50.49 | 30.23 |
| CDY67746 | Canola | nucleus | 64.08 | 29.73 |
| CDY19098 | Canola | cytosol | 66.99 | 28.87 |
| CDX92049 | Canola | plastid | 72.82 | 28.09 |
| CDY18932 | Canola | plastid | 66.99 | 27.49 |
| CDX74209 | Canola | plastid | 72.82 | 27.47 |
| CDY68635 | Canola | nucleus | 68.93 | 27.41 |
| CDY29956 | Canola | plastid | 72.82 | 27.27 |
| CDY57109 | Canola | plastid | 67.96 | 26.92 |
| CDY47970 | Canola | nucleus | 67.96 | 26.52 |
Protein Annotations
| EnsemblPlants:CDY35378 | EnsemblPlantsGene:GSBRNA2T00058355001 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31529 | PANTHER:PTHR31529:SF4 |
| PFAM:PF03195 | PFscan:PS50891 | ProteinID:CDY35378 | ProteinID:CDY35378.1 | UniParc:UPI0004EF1061 | UniProt:A0A078HF02 |
| MapMan:15.5.24 | : | : | : | : | : |
Description
BnaA03g19820DBnaA03g19820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF02]
Coordinates
chrLK032351:-:29550..29861
Molecular Weight (calculated)
11151.4 Da
IEP (calculated)
8.131
GRAVY (calculated)
0.111
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSGNITTA GTGSPCGACK FLRRKCLSDC IFAPYFSSEQ GAERFAAIHK VFGASNVSKL LLKVPIHDRC EAVVTIAYEA QARLHDPVYG CVSHIFSLQQ
101: QVD
101: QVD
001: MGGLGSPCGG CKFLRRKCVE GCVFAPYFCY EEGSSNFAAI HKVFGASNFS KLISHLPDHD RCDAVRTISY EAHSRLHDPI YGCVSQIFSL QQQVVSLQAQ
101: VVLLREEASR RFPQDDPGCN MKQQEKVLAQ QMPQDLHNWF HQGILDSDFD PMSGTTRDNE RSMDHNESPC SSNESLNYYQ EVNFPWSV
101: VVLLREEASR RFPQDDPGCN MKQQEKVLAQ QMPQDLHNWF HQGILDSDFD PMSGTTRDNE RSMDHNESPC SSNESLNYYQ EVNFPWSV
Arabidopsis Description
LBD14LOB domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.