CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35378	Canola	cytosol, nucleus, plastid	65.29	76.7
KRH32155	Soybean	plastid	79.34	45.07
KRG95644	Soybean	nucleus	72.73	41.31
EER95498	Sorghum	cytosol, nucleus, plastid	57.02	41.07
Zm00001d027678_P001	Maize	cytosol, nucleus, plastid	56.2	40.72
KRH73761	Soybean	cytosol, nucleus, plastid	23.97	40.28
KRH67347	Soybean	plastid	70.25	39.91
GSMUA_Achr5P13230_001	Banana	mitochondrion, plastid	59.5	37.31
Os03t0149000-01	Rice	plastid	57.02	37.3
HORVU4Hr1G080150.1	Barley	plastid	56.2	36.96
TraesCS4A01G415300.1	Wheat	plastid	56.2	36.76
TraesCS4D01G312700.1	Wheat	plastid	56.2	36.36
GSMUA_Achr1P01350_001	Banana	nucleus	60.33	36.32
TraesCS4B01G316100.1	Wheat	plastid	55.37	35.83
KRH76281	Soybean	cytosol, nucleus, plastid	57.02	34.85
Bra004693.1-P	Field mustard	plastid	69.42	34.43
CDY64515	Canola	nucleus, plastid	68.59	34.02
HORVU0Hr1G017670.2	Barley	plastid	58.68	33.81
CDY47969	Canola	nucleus	68.59	33.74
Bra016877.1-P	Field mustard	nucleus	68.59	33.74
Bra000257.1-P	Field mustard	nucleus	66.12	33.61
AT2G42430.1	Thale cress	plastid	67.77	33.47
Os02t0820500-01	Rice	plastid	59.5	33.33
CDY70198	Canola	nucleus	66.94	33.2
CDY22562	Canola	nucleus	65.29	33.19
TraesCS6B01G438700.1	Wheat	plastid	57.85	33.18
EES07771	Sorghum	plastid	58.68	33.02
CDY14831	Canola	nucleus	66.94	32.93
KRH65255	Soybean	cytosol, nucleus, plastid	57.02	32.55
TraesCS6A01G398400.1	Wheat	plastid	55.37	32.52
Zm00001d051891_P001	Maize	plastid	57.85	32.41
KRG95645	Soybean	mitochondrion, nucleus	55.37	32.21
TraesCS6D01G382600.1	Wheat	plastid	55.37	32.06
KRH67348	Soybean	nucleus	55.37	31.6
KRH59547	Soybean	mitochondrion, nucleus, plastid	37.19	31.47
KRH40590	Soybean	plastid	58.68	30.6
KRH00577	Soybean	plastid	58.68	30.34
KRH14351	Soybean	mitochondrion	35.54	30.07
KRH76282	Soybean	plastid	61.16	29.96
KRG97704	Soybean	mitochondrion	43.8	29.61
KRH19530	Soybean	mitochondrion, nucleus	57.85	29.54
KRH32157	Soybean	mitochondrion, nucleus	57.85	29.29
KRH14922	Soybean	mitochondrion	43.8	29.12
KRH65254	Soybean	plastid	60.33	29.08
KRG94981	Soybean	nucleus	56.2	28.45
KRH73279	Soybean	mitochondrion	43.8	28.19
KRH31169	Soybean	mitochondrion	43.8	28.04
KRH73061	Soybean	mitochondrion, nucleus	49.59	27.27
KRH71749	Soybean	cytosol, mitochondrion, nucleus	52.89	26.89
KRH32932	Soybean	cytosol, mitochondrion, nucleus	52.07	26.36
KRH15078	Soybean	plastid	49.59	25.97

Protein Annotations

EMBL:ACUP02008183	EnsemblPlants:KRH19529	EnsemblPlantsGene:GLYMA_13G121300	InterPro:IPR004883	InterPro:LOB	PANTHER:PTHR31529
PANTHER:PTHR31529:SF4	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH19529	ProteinID:KRH19529.1	SEG:seg
UniParc:UPI0006ED8910	UniProt:A0A0R0GVL9	MapMan:15.5.24	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:23424184..23426227

Molecular Weight (calculated)

13174.7 Da

IEP (calculated)

8.606

GRAVY (calculated)

-0.102

Length

121 amino acids

Sequence
(BLAST)

001: MTSATGNDTG SAGSSSGFGS PCGACKFLRR KCAADCIFAP YFCSEQGAAR FAAIHKVFGA SNVSKLLLRI PAHQRFEAML TLAYEAQARV RDPVYGCVSH
101: IFTLQQQGRE YIVESWNLKD N

Best Arabidopsis Sequence Match ( AT2G42430.1 )
(BLAST)

001: MASSGNGTTA GTGSPCGACK FLRRKCASDC IFAPYFSSEQ GAARFAAIHK VFGASNVSKL LLNVPIHDRC EAVVTIAYEA QARLHDPVYG CVSHIFALQQ
101: QVAFLQSQVM QMKAQIAGHQ TSAAGDLRHS SESTNQFMTW QQTSVSPIGS AYSTPYNHHQ PYYGHVNPNN PVSPQSSLEE SFSNTSSDVT TTANVRETHH
201: QTGGGVYGHD GIGFHEGYPN KKRSVSYCSS DLGELQALAL RMMKN

Arabidopsis Description

LBD16LOB domain-containing protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.