Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14351 | Soybean | mitochondrion | 72.22 | 36.36 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 70.83 | 35.66 |
| KRH19529 | Soybean | plastid | 40.28 | 23.97 |
| VIT_13s0019g03810.t01 | Wine grape | plastid | 40.28 | 20.86 |
| VIT_13s0019g03800.t01 | Wine grape | plastid | 38.89 | 19.05 |
| VIT_13s0019g03830.t01 | Wine grape | plastid | 40.28 | 17.16 |
| KRG97704 | Soybean | mitochondrion | 40.28 | 16.2 |
| KRH14922 | Soybean | mitochondrion | 40.28 | 15.93 |
| VIT_13s0019g03820.t01 | Wine grape | nucleus, plastid | 41.67 | 15.62 |
| VIT_13s0019g03840.t01 | Wine grape | nucleus, plastid | 41.67 | 15.46 |
| KRH73279 | Soybean | mitochondrion | 40.28 | 15.43 |
| KRH31169 | Soybean | mitochondrion | 40.28 | 15.34 |
| KRH67347 | Soybean | plastid | 43.06 | 14.55 |
| KRH73061 | Soybean | mitochondrion, nucleus | 44.44 | 14.55 |
| KRG95644 | Soybean | nucleus | 41.67 | 14.08 |
| KRH15078 | Soybean | plastid | 44.44 | 13.85 |
| KRH67348 | Soybean | nucleus | 40.28 | 13.68 |
| KRG95645 | Soybean | mitochondrion, nucleus | 38.89 | 13.46 |
| KRH32155 | Soybean | plastid | 38.89 | 13.15 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 36.11 | 13.13 |
| KRG94981 | Soybean | nucleus | 41.67 | 12.55 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 36.11 | 12.26 |
| KRH19530 | Soybean | mitochondrion, nucleus | 38.89 | 11.81 |
| KRH32157 | Soybean | mitochondrion, nucleus | 38.89 | 11.72 |
| KRH00577 | Soybean | plastid | 37.5 | 11.54 |
| KRH71749 | Soybean | cytosol, mitochondrion, nucleus | 37.5 | 11.34 |
| KRH40590 | Soybean | plastid | 36.11 | 11.21 |
| KRH32932 | Soybean | cytosol, mitochondrion, nucleus | 36.11 | 10.88 |
| KRH65254 | Soybean | plastid | 37.5 | 10.76 |
| KRH76282 | Soybean | plastid | 36.11 | 10.53 |
Protein Annotations
| EMBL:ACUP02001288 | EnsemblPlants:KRH73761 | EnsemblPlantsGene:GLYMA_02G292000 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31301 |
| PANTHER:PTHR31301:SF13 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH73761 | ProteinID:KRH73761.1 | UniParc:UPI000295A833 |
| UniProt:K7KBG3 | MapMan:15.5.24 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:47120871..47121243
Molecular Weight (calculated)
8164.6 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.472
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: MPSDCIFYSY FPVNDPQRFA CVHRIYGDNN VGKMLSGQTP ASLREQATNS KYFEAQFRTQ DPIYGCAGMI SE
001: MNPKRCAACK YLRRRCPKDC VFSPYFPPND PQKFACVHRI YGAGNVSKML QQLPDQTRAE AVESLCFEAK CRVDDPVYGC VGIIHLLKTQ IQKTQNELAK
101: TQAEIAVAQT KLSQTHISDF M
101: TQAEIAVAQT KLSQTHISDF M
Arabidopsis Description
LBD23LOB domain-containing protein 23 [Source:UniProtKB/Swiss-Prot;Acc:P59467]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.