CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97704	Soybean	mitochondrion	92.06	97.21
KRH14922	Soybean	mitochondrion	80.42	83.52
KRH73279	Soybean	mitochondrion	79.89	80.32
VIT_13s0067g01450.t01	Wine grape	plastid	64.02	70.76
Solyc03g095940.1.1	Tomato	plastid	55.03	61.18
AT3G11090.1	Thale cress	mitochondrion	52.38	60.0
PGSC0003DMT400071281	Potato	plastid	55.03	58.76
CDY00994	Canola	plastid	51.85	57.31
Bra034867.1-P	Field mustard	plastid	51.85	56.98
CDY08551	Canola	plastid	51.85	56.98
KRH19529	Soybean	plastid	28.04	43.8
KRH73761	Soybean	cytosol, nucleus, plastid	15.34	40.28
KRH14351	Soybean	mitochondrion	26.45	34.97
KRH59547	Soybean	mitochondrion, nucleus, plastid	25.93	34.27
KRH76281	Soybean	cytosol, nucleus, plastid	31.75	30.3
KRH65255	Soybean	cytosol, nucleus, plastid	32.28	28.77
KRH67347	Soybean	plastid	32.28	28.64
KRG95644	Soybean	nucleus	31.75	28.17
KRH40590	Soybean	plastid	34.39	28.02
KRH32155	Soybean	plastid	31.22	27.7
KRG95645	Soybean	mitochondrion, nucleus	29.63	26.92
KRH00577	Soybean	plastid	33.33	26.92
KRH67348	Soybean	nucleus	30.16	26.89
KRH32932	Soybean	cytosol, mitochondrion, nucleus	33.33	26.36
KRG94981	Soybean	nucleus	32.8	25.94
KRH65254	Soybean	plastid	34.39	25.9
KRH71749	Soybean	cytosol, mitochondrion, nucleus	32.28	25.63
KRH19530	Soybean	mitochondrion, nucleus	31.75	25.32
KRH76282	Soybean	plastid	32.8	25.1
KRH32157	Soybean	mitochondrion, nucleus	31.22	24.69
KRH73061	Soybean	mitochondrion, nucleus	27.51	23.64
KRH15078	Soybean	plastid	27.51	22.51

Protein Annotations

EMBL:ACUP02007125	EMBL:BT089179	EnsemblPlants:KRH31169	EnsemblPlantsGene:GLYMA_11G231500	EntrezGene:100305534	InterPro:IPR004883
InterPro:LOB	ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF24	PFAM:PF03195	PFscan:PS50891
ProteinID:KRH31169	ProteinID:KRH31169.1	SEG:seg	UniParc:UPI0001B1573F	UniProt:C6SVI6	MapMan:15.5.24

Description

hypothetical protein

Coordinates

chr11:-:32716751..32717855

Molecular Weight (calculated)

21065.2 Da

IEP (calculated)

7.737

GRAVY (calculated)

-0.152

Length

189 amino acids

Sequence
(BLAST)

001: MLVRGMKGYE PRSSSSCAAC KLLKRRCIPN CIFAPYFRSD ECKKFAKVHK VFGASNVSKI LIEVPEEQRE DTVNSLAYEA EARLRDPVYG CIGAIALLQR
101: KMVELQHDLV IAKDRLARCH AAATAAATTT TTTSIPSPDI LHANVSLPPF PDFYTSSSDF NDIFCHSSSS QLLSRHETVD DFNQIPYIF

Best Arabidopsis Sequence Match ( AT3G11090.1 )
(BLAST)

001: MRGHEPRSSS SCAACKLLKR RCTPTCIFAP YFRSSDLITF AKVHKVFGAS NVSKLLGEVP EEQRQETVNS LAYEAEVRLK DPVYGCIGAI ASLQKKMLEL
101: QHDLAVARTR LLAHSGVNNS QVSPLDDSPE LAAFLDLVPY SDLMLLDGST NLDAYLYDLG QPPFV

Arabidopsis Description

LBD21LBD21 [Source:UniProtKB/TrEMBL;Acc:A0A178V6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.