CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67348	Soybean	nucleus	92.31	90.57
KRH32157	Soybean	mitochondrion, nucleus	79.33	69.04
KRH19530	Soybean	mitochondrion, nucleus	76.92	67.51
VIT_07s0005g03020.t01	Wine grape	mitochondrion, nucleus	70.67	63.36
KRH19529	Soybean	plastid	32.21	55.37
Solyc09g066270.2.1	Tomato	nucleus	62.98	53.69
PGSC0003DMT400025142	Potato	nucleus	62.98	53.47
GSMUA_Achr4P25190_001	Banana	mitochondrion	54.81	53.27
GSMUA_AchrUn_...	Banana	mitochondrion	55.77	50.0
GSMUA_Achr11P...	Banana	mitochondrion	49.52	48.82
GSMUA_Achr1P06580_001	Banana	mitochondrion	47.6	47.37
GSMUA_Achr10P...	Banana	mitochondrion	48.56	46.12
GSMUA_Achr1P01360_001	Banana	mitochondrion, nucleus, plastid	47.12	45.79
TraesCS4D01G001700.1	Wheat	mitochondrion	47.6	45.62
GSMUA_AchrUn_...	Banana	mitochondrion	49.52	45.58
GSMUA_Achr8P14330_001	Banana	mitochondrion	50.96	45.3
KRH67347	Soybean	plastid	45.67	44.6
KRG95644	Soybean	nucleus	45.19	44.13
HORVU4Hr1G000880.4	Barley	cytosol, nucleus, plastid	47.12	43.56
Zm00001d027679_P001	Maize	cytosol, nucleus	50.0	42.62
TraesCS4A01G312500.1	Wheat	mitochondrion	44.71	42.47
EER92849	Sorghum	mitochondrion	50.0	42.45
KRH73061	Soybean	mitochondrion, nucleus	44.23	41.82
KRH32155	Soybean	plastid	42.79	41.78
TraesCSU01G132900.1	Wheat	nucleus	47.12	41.7
Os03t0149100-01	Rice	mitochondrion	51.44	41.31
Zm00001d048401_P001	Maize	nucleus	45.67	40.6
TraesCS4B01G001200.1	Wheat	nucleus	46.15	40.17
TraesCS6B01G072200.1	Wheat	nucleus	45.67	40.08
KRH73761	Soybean	cytosol, nucleus, plastid	13.46	38.89
TraesCS6A01G053700.1	Wheat	nucleus	44.23	38.82
KRH76281	Soybean	cytosol, nucleus, plastid	35.58	37.37
KRH15078	Soybean	plastid	41.35	37.23
KRG94981	Soybean	nucleus	41.35	35.98
HORVU4Hr1G080160.1	Barley	plastid	49.04	35.92
TraesCS4D01G312800.1	Wheat	plastid	49.04	35.66
KRH65254	Soybean	plastid	42.79	35.46
TraesCS4B01G316200.1	Wheat	nucleus, plastid	49.04	35.42
KRH65255	Soybean	cytosol, nucleus, plastid	36.06	35.38
KRH71749	Soybean	cytosol, mitochondrion, nucleus	40.38	35.29
KRH40590	Soybean	plastid	38.94	34.91
TraesCS4A01G415400.1	Wheat	nucleus	48.08	34.6
KRH76282	Soybean	plastid	40.87	34.41
KRH32932	Soybean	cytosol, mitochondrion, nucleus	39.42	34.31
KRH00577	Soybean	plastid	38.46	34.19
KRH59547	Soybean	mitochondrion, nucleus, plastid	22.12	32.17
KRH14922	Soybean	mitochondrion	26.92	30.77
KRH14351	Soybean	mitochondrion	21.15	30.77
KRH73279	Soybean	mitochondrion	27.4	30.32
KRH31169	Soybean	mitochondrion	26.92	29.63
KRG97704	Soybean	mitochondrion	25.48	29.61

Protein Annotations

EMBL:ACUP02012124	EnsemblPlants:KRG95645	EnsemblPlantsGene:GLYMA_19G163000	InterPro:IPR004883	InterPro:LOB	PANTHER:PTHR31529
PANTHER:PTHR31529:SF2	PFAM:PF03195	PFscan:PS50891	ProteinID:KRG95645	ProteinID:KRG95645.1	SEG:seg
UniParc:UPI00023DE14E	UniProt:I1N9P6	MapMan:15.5.24	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:42374340..42375503

Molecular Weight (calculated)

23089.0 Da

IEP (calculated)

6.759

GRAVY (calculated)

-0.379

Length

208 amino acids

Sequence
(BLAST)

001: MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGSTHFAAI HKVFGASNVS KHLAHLPVSD RCEAAVTISY EAQARLQDPI YGCVAHIFAL QQQVVSLQAQ
101: LVYLREQASQ IYLNGSATEN PNEKYLGKPT TFPQDLQSWF QMENSNLASQ FLPNLSTNPS TQYYGNTNTL VEPNPIGNYE NSGTVEESIS FSSFKESCNS
201: MSYDMQRQ

Best Arabidopsis Sequence Match ( AT3G58190.1 )
(BLAST)

001: MTSSSSSSGS PCGACKFLRR KCAKGCVFAP YFCHEQGASH FAAIHKVFGA SNASKLLSHL PISDRCEAAI TISYEAQARL QDPIYGCVSH IFALQQQVVN
101: LQAELEILKQ QAAQSMIFAD SPTSENPNSY YGDTTKAPYH HDHQNIYHHH DQTHLVYQTG SSGTVQHGDA TESSYHNETS SGMGEFSIYS DLEQHLNTFN
201: QDHLKELQSA NFGYISFS

Arabidopsis Description

LBD29LBD29 [Source:UniProtKB/TrEMBL;Acc:A0A178VM67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.