Factsheet for GSMUA_Achr11P02110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P14330_001	Banana	mitochondrion	67.3	60.68
GSMUA_Achr4P25190_001	Banana	mitochondrion	53.55	52.8
GSMUA_AchrUn_...	Banana	mitochondrion	54.98	50.0
KRG95645	Soybean	mitochondrion, nucleus	48.82	49.52
VIT_07s0005g03020.t01	Wine grape	mitochondrion, nucleus	54.03	49.14
GSMUA_Achr1P01360_001	Banana	mitochondrion, nucleus, plastid	49.76	49.07
KRH67348	Soybean	nucleus	48.82	48.58
GSMUA_Achr10P...	Banana	mitochondrion	50.24	48.4
GSMUA_Achr1P06580_001	Banana	mitochondrion	47.87	48.33
KRH32157	Soybean	mitochondrion, nucleus	52.61	46.44
KRH19530	Soybean	mitochondrion, nucleus	52.13	46.41
GSMUA_AchrUn_...	Banana	mitochondrion	48.82	45.58
GSMUA_Achr3P27340_001	Banana	mitochondrion, plastid	38.86	44.81
GSMUA_Achr1P01350_001	Banana	nucleus	42.18	44.28
Zm00001d027679_P001	Maize	cytosol, nucleus	49.29	42.62
EER92849	Sorghum	mitochondrion	49.29	42.45
Solyc09g066270.2.1	Tomato	nucleus	47.39	40.98
GSMUA_Achr5P13230_001	Banana	mitochondrion, plastid	37.44	40.93
Os03t0149100-01	Rice	mitochondrion	50.24	40.93
PGSC0003DMT400025142	Potato	nucleus	47.39	40.82
Zm00001d048401_P001	Maize	nucleus	44.55	40.17
GSMUA_Achr5P11330_001	Banana	plastid	42.18	36.93
GSMUA_Achr1P02520_001	Banana	cytosol, nucleus, plastid	42.18	36.78
GSMUA_Achr2P11240_001	Banana	plastid	40.76	36.44
TraesCS4A01G415400.1	Wheat	nucleus	46.45	33.91
HORVU4Hr1G080160.1	Barley	plastid	45.5	33.8
TraesCS4D01G312800.1	Wheat	plastid	45.5	33.57
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	40.28	33.07
TraesCS4B01G316200.1	Wheat	nucleus, plastid	45.02	32.99
GSMUA_Achr11P...	Banana	mitochondrion	21.8	29.3
GSMUA_Achr4P28810_001	Banana	nucleus	36.02	25.76

Protein Annotations

EnsemblPlants:GSMUA_Achr11P02110_001	EnsemblPlants:GSMUA_Achr11T02110_001	EnsemblPlantsGene:GSMUA_Achr11G02110_001	InterPro:IPR004883	InterPro:LOB	ncoils:Coil
PANTHER:PTHR31529	PANTHER:PTHR31529:SF2	PFAM:PF03195	PFscan:PS50891	SEG:seg	UniParc:UPI000294C232
UniProt:M0RNP1	MapMan:15.5.24	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G02110_001]

Coordinates

chr11:+:1445428..1446128

Molecular Weight (calculated)

23302.5 Da

IEP (calculated)

5.471

GRAVY (calculated)

-0.171

Length

211 amino acids

Sequence
(BLAST)

001: MAGFGSPCGA CKFLRRKCVS GCVFAPFFHH EQGAAHFAAI HKVFGASNVA KLLMHLPMAD RSEAAITISY EAQARLQNPI YGCVAHIFAL QQQVVNLQAQ
101: VASLEAQAAQ GLGNGMTASL NREEDRLYSA LQPRQHDLQG FIDQARPFSS SPPSDVECMN SYNNWISEVN FDMADEDLAL GIENETLSPM ACFDMQDDFW
201: KSVYHDANVR H

Best Arabidopsis Sequence Match ( AT2G42440.1 )
(BLAST)

001: MTGSGSPCGA CKFLRRRCVK GCVFAPYFCH EQGASHFAAI HQVFGASNAS KLLSHLPMED RREAATTIYY EAQARRQDPI YGCVSHIFSL QQQVVNLQTQ
101: LEILKQQATQ SMMAIDSPSI ENPNYYQDTK PQYLQESHDL HHHHLTTSNC QTEQNSDLKN IMTSCYHQME IETTPFTGAG GDTMAGSYYY NSSSGCSEEL
201: KSVSTNGEFS KYSELDQHLT NTFNQYRHGG NNLISESLGY ITYS

Arabidopsis Description

LBD17LOB domain-containing protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLB6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.