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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400033253 Potato plastid 27.12 57.55
GSMUA_Achr2P11240_001 Banana plastid 38.64 48.31
GSMUA_Achr5P11330_001 Banana plastid 38.98 47.72
VIT_15s0048g00830.t01 Wine grape nucleus 40.0 47.01
GSMUA_Achr1P02520_001 Banana cytosol, nucleus, plastid 37.63 45.87
GSMUA_AchrUn_... Banana cytosol, nucleus, plastid 39.66 45.53
KRH65254 Soybean plastid 38.31 45.02
AT4G00220.1 Thale cress plastid 34.58 44.74
KRH76282 Soybean plastid 36.95 44.13
HORVU4Hr1G063160.1 Barley plastid 37.63 43.36
CDY54923 Canola cytosol, nucleus, plastid 32.54 42.86
CDY69735 Canola cytosol, nucleus, plastid 32.54 42.86
Bra008514.1-P Field mustard cytosol, nucleus, plastid 32.54 42.86
Zm00001d030364_P001 Maize plastid 35.25 42.45
Solyc01g091420.1.1 Tomato plastid 38.98 42.44
Bra037323.1-P Field mustard plastid 32.2 42.41
CDY07236 Canola plastid 32.2 42.41
TraesCS4D01G225200.1 Wheat nucleus 37.29 42.31
KXG38649 Sorghum plastid 37.29 42.31
Bra004910.1-P Field mustard plastid 36.27 42.29
Zm00001d047921_P001 Maize plastid 37.97 42.26
GSMUA_Achr5P13230_001 Banana mitochondrion, plastid 27.46 41.97
Zm00001d028413_P001 Maize plastid 36.95 41.92
KRH00577 Soybean plastid 33.22 41.88
CDY18932 Canola plastid 35.59 41.83
TraesCS4A01G067300.1 Wheat nucleus 37.29 41.35
Os10t0162600-00 Rice nucleus 37.63 41.26
AT2G45420.1 Thale cress plastid 36.61 41.22
TraesCS4B01G224600.1 Wheat plastid 36.61 41.22
Os03t0246900-00 Rice nucleus 38.31 41.09
KRH40590 Soybean plastid 32.2 40.95
EER92557 Sorghum nucleus 37.97 40.58
Bra040311.1-P Field mustard nucleus 35.59 40.54
CDY68635 Canola nucleus 35.59 40.54
CDY57109 Canola plastid 35.25 40.0
GSMUA_Achr4P25190_001 Banana mitochondrion 28.47 39.25
GSMUA_Achr3P27340_001 Banana mitochondrion, plastid 24.07 38.8
GSMUA_Achr1P01360_001 Banana mitochondrion, nucleus, plastid 27.8 38.32
GSMUA_Achr1P01350_001 Banana nucleus 25.76 37.81
GSMUA_Achr1P06580_001 Banana mitochondrion 26.78 37.8
GSMUA_Achr10P... Banana mitochondrion 27.8 37.44
GSMUA_AchrUn_... Banana mitochondrion 29.15 37.07
GSMUA_Achr11P... Banana mitochondrion 25.76 36.02
GSMUA_AchrUn_... Banana mitochondrion 27.12 35.4
GSMUA_Achr8P14330_001 Banana mitochondrion 27.46 34.62
GSMUA_Achr11P... Banana mitochondrion 17.29 32.48
Protein Annotations
EnsemblPlants:GSMUA_Achr4P28810_001EnsemblPlants:GSMUA_Achr4T28810_001EnsemblPlantsGene:GSMUA_Achr4G28810_001InterPro:IPR004883InterPro:LOBncoils:Coil
PANTHER:PTHR31529PANTHER:PTHR31529:SF3PFAM:PF03195PFscan:PS50891SEG:segUniParc:UPI000294ADD0
UniProt:M0SSZ3MapMan:15.5.24::::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G28810_001]
Coordinates
chr4:-:27065325..27066572
Molecular Weight (calculated)
32043.7 Da
IEP (calculated)
5.564
GRAVY (calculated)
-0.313
Length
295 amino acids
Sequence
(BLAST)
001: MDSNTYSSQL GGGSGGRCAA CKTMKRKCVK GCIFAPYFDA ERGAARFAAV HKLFGASNVS KLLLQIPIDK RVDAIATLCY EAQARLRDPV YGCVAHIFAL
101: QQQQVVNLRA ELSILQTQLE ALQELPLPPV PTFPSPTPFS SILPTTWGLS DVEAPLVQPS RQQHQLWTDG THLLAISGGG DGVVANCSYA QENLLTGRPP
201: SSSPSTADLS TFVAPDLVQP ASLHQQQHQL WSFRTNLPDG MNYEENFLSG TDRLPPTILP TTGDRTARQH EPQQLWADGT SPSDGSGGDD GEWWW
Best Arabidopsis Sequence Match ( AT2G45410.1 )
(BLAST)
001: MMTGNLNGGG RGGEGPCGAC KFLRRKCVKG CVFAPYFDAE QGTARFAAVH KVFGASNASK MLLRLPLHKR LDAVVTLCYE AMARIRDPVY GSVGHLFSLQ
101: HQVMNLQAEL AHVQARLSTI QRFPLQSPQQ MQPPSFDPAH NNEYAMEPSN LDSVWGEEHL LQDGTGDGDF QELASQFVSR YLPAVKLPAC T
Arabidopsis Description
LBD19LBD19 [Source:UniProtKB/TrEMBL;Acc:A0A178VSY1]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.