Factsheet for Zm00001d030364_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38649	Sorghum	plastid	82.86	78.08
PGSC0003DMT400033253	Potato	plastid	36.73	64.75
Os10t0162600-00	Rice	nucleus	62.04	56.51
Zm00001d028413_P001	Maize	plastid	57.96	54.62
VIT_15s0048g00830.t01	Wine grape	nucleus	55.92	54.58
Zm00001d047921_P001	Maize	plastid	58.78	54.34
KRH00577	Soybean	plastid	50.61	52.99
Bra037323.1-P	Field mustard	plastid	47.76	52.23
CDY07236	Canola	plastid	47.76	52.23
AT4G00220.1	Thale cress	plastid	48.57	52.19
KRH65254	Soybean	plastid	53.47	52.19
KRH40590	Soybean	plastid	48.98	51.72
CDY69735	Canola	cytosol, nucleus, plastid	46.94	51.34
KRH76282	Soybean	plastid	51.43	51.01
Bra008514.1-P	Field mustard	cytosol, nucleus, plastid	46.53	50.89
CDY54923	Canola	cytosol, nucleus, plastid	46.53	50.89
Bra004910.1-P	Field mustard	plastid	50.61	49.01
CDY18932	Canola	plastid	50.2	49.0
Solyc01g091420.1.1	Tomato	plastid	53.47	48.34
AT2G45420.1	Thale cress	plastid	50.61	47.33
CDY57109	Canola	plastid	48.98	46.15
Bra040311.1-P	Field mustard	nucleus	48.57	45.95
CDY68635	Canola	nucleus	48.57	45.95
Zm00001d027678_P001	Maize	cytosol, nucleus, plastid	31.02	45.51
Zm00001d043311_P001	Maize	plastid	35.51	39.37
Zm00001d031882_P001	Maize	plastid	33.47	38.14
Zm00001d051891_P001	Maize	plastid	32.65	37.04
Zm00001d027679_P001	Maize	cytosol, nucleus	36.73	36.89
Zm00001d048401_P001	Maize	nucleus	34.29	35.9
GSMUA_Achr4P28810_001	Banana	nucleus	42.45	35.25
Zm00001d034384_P001	Maize	plastid	21.22	31.71
Zm00001d031544_P001	Maize	plastid	24.9	29.61
Zm00001d007919_P001	Maize	mitochondrion	28.57	10.25
Zm00001d018832_P001	Maize	nucleus	24.49	9.77

Protein Annotations

EnsemblPlants:Zm00001d030364_P001	EnsemblPlants:Zm00001d030364_T001	EnsemblPlantsGene:Zm00001d030364	EntrezGene:103638452	InterPro:IPR004883	InterPro:LOB
PANTHER:PTHR31529	PANTHER:PTHR31529:SF3	PFAM:PF03195	PFscan:PS50891	ProteinID:ONM00875.1	SEG:seg
UniParc:UPI000221CEC8	UniProt:A0A1D6KC74	MapMan:15.5.24	:	:	:

Description

LBD-transcription factor 7LOB domain-containing protein 31

Coordinates

chr1:+:126597854..126599207

Molecular Weight (calculated)

25339.0 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.149

Length

245 amino acids

Sequence
(BLAST)

001: MSSSVLGASA GGGGGGSSTG GPTRGVAGAG GGGPCGACKF LRRKCVTGCV FAPYFDSEQG AAHFAAVHKV FGASNVSKLL LQVPPHKRLD AVVTVCYEAQ
101: ARIRDPVYGC VSHVFALQQQ VVNLQTELTY LQGHLSTMEP PTPPPLAAQN QMPMTTAAFC VSNLPWPSND IPPTVDVSTL LEEPQTQQSN WVSQQQQHYV
201: MVGEGSGAGV SGSGAGARGG GDLQLLDRHG TAPVWSQPEP PPCTQ

Best Arabidopsis Sequence Match ( AT4G00220.1 )
(BLAST)

001: MSSSGNPSSS SGGGGGPCGA CKFLRRKCVA GCIFAPYFDS EQGAAHFAAV HKVFGASNVS KLLHHVPEHK RPDAVVSICF EAQARLRDPI YGCVSHIVSL
101: QQQVVSLQTE LSYLQAHLAT LELPQPQPPQ VPVSSSGSLQ ALSITDLPTI SPSVYDLSSI FEPVMSSTWA MQQQPRPSDH LFGVPSSSNM GGGGELQALA
201: REFIHGGQMP AQPSPGTSGS ASSVIKRE

Arabidopsis Description

LBD30LOB domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:O81323]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.