Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92557 | Sorghum | nucleus | 93.85 | 88.41 |
| Zm00001d047921_P001 | Maize | plastid | 89.23 | 87.55 |
| Os03t0246900-00 | Rice | nucleus | 83.46 | 78.91 |
| TraesCS4D01G225200.1 | Wheat | nucleus | 77.31 | 77.31 |
| TraesCS4B01G224600.1 | Wheat | plastid | 77.31 | 76.72 |
| HORVU4Hr1G063160.1 | Barley | plastid | 75.38 | 76.56 |
| TraesCS4A01G067300.1 | Wheat | nucleus | 77.69 | 75.94 |
| PGSC0003DMT400033253 | Potato | plastid | 39.23 | 73.38 |
| VIT_15s0048g00830.t01 | Wine grape | nucleus | 64.23 | 66.53 |
| KRH65254 | Soybean | plastid | 59.62 | 61.75 |
| CDY18932 | Canola | plastid | 58.46 | 60.56 |
| KRH76282 | Soybean | plastid | 56.92 | 59.92 |
| Bra004910.1-P | Field mustard | plastid | 58.08 | 59.68 |
| KRH00577 | Soybean | plastid | 53.46 | 59.4 |
| Bra008514.1-P | Field mustard | cytosol, nucleus, plastid | 51.15 | 59.38 |
| CDY54923 | Canola | cytosol, nucleus, plastid | 50.77 | 58.93 |
| CDY69735 | Canola | cytosol, nucleus, plastid | 50.77 | 58.93 |
| CDY07236 | Canola | plastid | 50.77 | 58.93 |
| Bra037323.1-P | Field mustard | plastid | 50.77 | 58.93 |
| AT2G45420.1 | Thale cress | plastid | 58.85 | 58.4 |
| AT4G00220.1 | Thale cress | plastid | 51.15 | 58.33 |
| Solyc01g091420.1.1 | Tomato | plastid | 60.77 | 58.3 |
| KRH40590 | Soybean | plastid | 51.92 | 58.19 |
| Zm00001d030364_P001 | Maize | plastid | 54.62 | 57.96 |
| Bra040311.1-P | Field mustard | nucleus | 57.31 | 57.53 |
| CDY57109 | Canola | plastid | 57.31 | 57.31 |
| CDY68635 | Canola | nucleus | 56.92 | 57.14 |
| Zm00001d027678_P001 | Maize | cytosol, nucleus, plastid | 29.62 | 46.11 |
| Zm00001d051891_P001 | Maize | plastid | 35.0 | 42.13 |
| Zm00001d031882_P001 | Maize | plastid | 33.85 | 40.93 |
| Zm00001d027679_P001 | Maize | cytosol, nucleus | 37.69 | 40.16 |
| Zm00001d048401_P001 | Maize | nucleus | 34.62 | 38.46 |
| Zm00001d043311_P001 | Maize | plastid | 32.31 | 38.01 |
| GSMUA_Achr4P28810_001 | Banana | nucleus | 41.92 | 36.95 |
| Zm00001d034384_P001 | Maize | plastid | 21.54 | 34.15 |
| Zm00001d031544_P001 | Maize | plastid | 23.46 | 29.61 |
| Zm00001d018832_P001 | Maize | nucleus | 25.77 | 10.91 |
| Zm00001d007919_P001 | Maize | mitochondrion | 28.08 | 10.69 |
Protein Annotations
| EMBL:BT061431 | EnsemblPlants:Zm00001d028413_P001 | EnsemblPlants:Zm00001d028413_T001 | EnsemblPlantsGene:Zm00001d028413 | EntrezGene:100381506 | InterPro:IPR004883 |
| InterPro:LOB | PANTHER:PTHR31529 | PANTHER:PTHR31529:SF3 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:ONL95949.1 |
| SEG:seg | UniParc:UPI0001948884 | UniProt:C0HGH5 | MapMan:15.5.24 | : | : |
Description
LBD-transcription factor 3LOB domain-containing protein 31
Coordinates
chr1:-:34109298..34111567
Molecular Weight (calculated)
26839.9 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.269
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAGGGGGGT STLGGGGPSG SGSGGPGGSG GGGPCGACKF LRRKCVSGCI FAPYFDSEQG AAHFAAVHKV FGASNVSKLL LQIPAHKRLD AVVTICYEAQ
101: ARLRDPVYGC VAHIFALQQQ VVNLQAELTY LQAHLATLEL PAPPPLPAPP QMPMPGPFSI SDLPLSTSVP TTVDLSALFD PPPPQWATAQ QPHHHHQQPP
201: QHHQLRQPAP YGAGASVRPG GGPGMAESSG GDELQSLARE LLDRHRSGGV KLEHPPPHSR
101: ARLRDPVYGC VAHIFALQQQ VVNLQAELTY LQAHLATLEL PAPPPLPAPP QMPMPGPFSI SDLPLSTSVP TTVDLSALFD PPPPQWATAQ QPHHHHQQPP
201: QHHQLRQPAP YGAGASVRPG GGPGMAESSG GDELQSLARE LLDRHRSGGV KLEHPPPHSR
001: MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR
Arabidopsis Description
LBD18LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.