Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40590 | Soybean | plastid | 88.03 | 88.79 |
| VIT_15s0048g00830.t01 | Wine grape | nucleus | 67.52 | 62.95 |
| KRH76282 | Soybean | plastid | 61.97 | 58.7 |
| KRH19529 | Soybean | plastid | 30.34 | 58.68 |
| KRH65254 | Soybean | plastid | 62.82 | 58.57 |
| GSMUA_Achr5P11330_001 | Banana | plastid | 59.83 | 58.09 |
| CDY18932 | Canola | plastid | 61.11 | 56.97 |
| Bra004910.1-P | Field mustard | plastid | 61.11 | 56.52 |
| GSMUA_Achr1P02520_001 | Banana | cytosol, nucleus, plastid | 58.12 | 56.2 |
| AT2G45420.1 | Thale cress | plastid | 61.97 | 55.34 |
| CDY57109 | Canola | plastid | 60.68 | 54.62 |
| GSMUA_Achr2P11240_001 | Banana | plastid | 54.7 | 54.24 |
| Bra040311.1-P | Field mustard | nucleus | 59.4 | 53.67 |
| Zm00001d028413_P001 | Maize | plastid | 59.4 | 53.46 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 58.55 | 53.31 |
| CDY68635 | Canola | nucleus | 58.97 | 53.28 |
| HORVU4Hr1G063160.1 | Barley | plastid | 58.12 | 53.12 |
| TraesCS4D01G225200.1 | Wheat | nucleus | 58.97 | 53.08 |
| Zm00001d047921_P001 | Maize | plastid | 59.83 | 52.83 |
| Os03t0246900-00 | Rice | nucleus | 61.54 | 52.36 |
| TraesCS4B01G224600.1 | Wheat | plastid | 58.12 | 51.91 |
| TraesCS4A01G067300.1 | Wheat | nucleus | 58.97 | 51.88 |
| EER92557 | Sorghum | nucleus | 59.83 | 50.72 |
| Zm00001d030364_P001 | Maize | plastid | 52.99 | 50.61 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 42.31 | 50.0 |
| Os10t0162600-00 | Rice | nucleus | 57.27 | 49.81 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 43.59 | 48.11 |
| KXG38649 | Sorghum | plastid | 53.42 | 48.08 |
| KRG95644 | Soybean | nucleus | 37.61 | 41.31 |
| KRH67347 | Soybean | plastid | 36.75 | 40.38 |
| KRH32155 | Soybean | plastid | 36.32 | 39.91 |
| KRG95645 | Soybean | mitochondrion, nucleus | 34.19 | 38.46 |
| KRH67348 | Soybean | nucleus | 34.19 | 37.74 |
| KRH73761 | Soybean | cytosol, nucleus, plastid | 11.54 | 37.5 |
| KRH19530 | Soybean | mitochondrion, nucleus | 36.75 | 36.29 |
| KRH32157 | Soybean | mitochondrion, nucleus | 36.75 | 35.98 |
| KRH73279 | Soybean | mitochondrion | 27.78 | 34.57 |
| KRH71749 | Soybean | cytosol, mitochondrion, nucleus | 35.04 | 34.45 |
| KRG97704 | Soybean | mitochondrion | 26.07 | 34.08 |
| KRH14922 | Soybean | mitochondrion | 26.5 | 34.07 |
| KRG94981 | Soybean | nucleus | 34.62 | 33.89 |
| KRH31169 | Soybean | mitochondrion | 26.92 | 33.33 |
| GSMUA_Achr4P28810_001 | Banana | nucleus | 41.88 | 33.22 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 20.09 | 32.87 |
| KRH73061 | Soybean | mitochondrion, nucleus | 30.34 | 32.27 |
| KRH32932 | Soybean | cytosol, mitochondrion, nucleus | 32.91 | 32.22 |
| KRH15078 | Soybean | plastid | 31.2 | 31.6 |
| KRH14351 | Soybean | mitochondrion | 19.23 | 31.47 |
Protein Annotations
| EMBL:ACUP02011454 | EnsemblPlants:KRH00577 | EnsemblPlantsGene:GLYMA_18G221000 | EntrezGene:100777737 | InterPro:IPR004883 | InterPro:LOB |
| PANTHER:PTHR31529 | PANTHER:PTHR31529:SF3 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH00577 | ProteinID:KRH00577.1 |
| SEG:seg | UniParc:UPI0001BA8D4B | UniProt:I1N3F1 | MapMan:15.5.24 | : | : |
Description
hypothetical protein
Coordinates
chr18:+:50818873..50823500
Molecular Weight (calculated)
24429.9 Da
IEP (calculated)
8.151
GRAVY (calculated)
-0.106
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGNGGGGS SSGTGSPCGA CKFLRRKCVS GCIFAPYFDS EQGTSHFAAV HKVFGASNVS KLLLSIPVHR RLDTVITICY EAQSRIRDPV YGCVAHIFAL
101: QQQLVSLQAE LSYLHGHLAQ MELPQPSPPP PPPQTTAAPP SGFSIADLPP ATVAAVPATT YDLSSLFDPL GQTSWAMQQR AIDLRQYLAA AAAPSTTSGA
201: DIQAVARDIP HRHGSPPSPP ASSSNASPSL SHSK
101: QQQLVSLQAE LSYLHGHLAQ MELPQPSPPP PPPQTTAAPP SGFSIADLPP ATVAAVPATT YDLSSLFDPL GQTSWAMQQR AIDLRQYLAA AAAPSTTSGA
201: DIQAVARDIP HRHGSPPSPP ASSSNASPSL SHSK
001: MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR
Arabidopsis Description
LBD18LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.