Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73061 | Soybean | mitochondrion, nucleus | 85.71 | 90.0 |
| VIT_13s0019g02060.t01 | Wine grape | mitochondrion, nucleus | 50.22 | 52.97 |
| KRH19529 | Soybean | plastid | 25.97 | 49.59 |
| AT5G06080.1 | Thale cress | mitochondrion, nucleus | 36.8 | 48.02 |
| Bra009161.1-P | Field mustard | nucleus | 36.36 | 45.9 |
| CDX98901 | Canola | nucleus | 36.36 | 45.9 |
| CDY60434 | Canola | nucleus | 35.93 | 45.36 |
| KRH73761 | Soybean | cytosol, nucleus, plastid | 13.85 | 44.44 |
| KRG95645 | Soybean | mitochondrion, nucleus | 37.23 | 41.35 |
| KRH67348 | Soybean | nucleus | 36.8 | 40.09 |
| PGSC0003DMT400097267 | Potato | cytosol, mitochondrion, plastid | 25.11 | 37.42 |
| KRH32157 | Soybean | mitochondrion, nucleus | 37.23 | 35.98 |
| KRH19530 | Soybean | mitochondrion, nucleus | 35.5 | 34.6 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 21.21 | 34.27 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 29.0 | 33.84 |
| KRG95644 | Soybean | nucleus | 30.74 | 33.33 |
| KRH67347 | Soybean | plastid | 30.74 | 33.33 |
| KRH14351 | Soybean | mitochondrion | 20.35 | 32.87 |
| KRH32155 | Soybean | plastid | 29.44 | 31.92 |
| KRH00577 | Soybean | plastid | 31.6 | 31.2 |
| KRH76282 | Soybean | plastid | 33.33 | 31.17 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 28.57 | 31.13 |
| KRH40590 | Soybean | plastid | 31.17 | 31.03 |
| KRH65254 | Soybean | plastid | 32.9 | 30.28 |
| KRG94981 | Soybean | nucleus | 31.17 | 30.13 |
| KRG97704 | Soybean | mitochondrion | 22.51 | 29.05 |
| KRH71749 | Soybean | cytosol, mitochondrion, nucleus | 29.87 | 28.99 |
| KRH32932 | Soybean | cytosol, mitochondrion, nucleus | 29.87 | 28.87 |
| KRH14922 | Soybean | mitochondrion | 22.51 | 28.57 |
| KRH73279 | Soybean | mitochondrion | 22.51 | 27.66 |
| KRH31169 | Soybean | mitochondrion | 22.51 | 27.51 |
Protein Annotations
| EMBL:ACUP02008559 | EnsemblPlants:KRH15078 | EnsemblPlantsGene:GLYMA_14G066900 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF6 | PFAM:PF03195 | PFscan:PS50891 | PFscan:PS51257 | ProteinID:KRH15078 | ProteinID:KRH15078.1 |
| SEG:seg | UniParc:UPI000233B138 | UniProt:K7M5B3 | MapMan:15.5.24 | : | : |
Description
hypothetical protein
Coordinates
chr14:-:5528647..5529587
Molecular Weight (calculated)
25431.7 Da
IEP (calculated)
5.956
GRAVY (calculated)
-0.238
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKSVKNFG TTTGFGSSCG ACKFLRRKCT SDCVFAPYFS YDQASTHFAA VHKIYGASNV SKLLSHLPIH NRSDAAITIS YEALARMQDP IYGCVAHIYA
101: LQHQVASLQE EIDALGSLMA NSTVSVVNCG SDQEPMTSNN GTQYNILQHD ATRTQYCQNN LANFLSQEAI SATVFKSLDS QMDIELPSAH VEEPSSFGDF
201: NSNPLEQFLS GIDQEVFVNH PWFKHNADIK N
101: LQHQVASLQE EIDALGSLMA NSTVSVVNCG SDQEPMTSNN GTQYNILQHD ATRTQYCQNN LANFLSQEAI SATVFKSLDS QMDIELPSAH VEEPSSFGDF
201: NSNPLEQFLS GIDQEVFVNH PWFKHNADIK N
001: MASHGSSCGA CKFLRRKCNR DCVFSPYFSY EQASSHFAAV HKVFGASNVS KHLLHLPQHQ RNIAAITISY EALSRMRDPV YGCVAHIFAL HQQVVTLQEE
101: IEFLGSQMKN FSYSNQNGSQ LNNIPEFVNQ MTMATTNFVD ESVLNNADGR NCYDGFFTNS EEMLVNHQWL QNMDYYY
101: IEFLGSQMKN FSYSNQNGSQ LNNIPEFVNQ MTMATTNFVD ESVLNNADGR NCYDGFFTNS EEMLVNHQWL QNMDYYY
Arabidopsis Description
LBD33LOB domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS8]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.