CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59547	Soybean	mitochondrion, nucleus, plastid	84.62	84.62
KRH73761	Soybean	cytosol, nucleus, plastid	36.36	72.22
Solyc01g109240.1.1	Tomato	mitochondrion	47.55	56.2
CDX83633	Canola	cytosol, mitochondrion, nucleus, plastid	45.45	55.56
CDY28537	Canola	mitochondrion	46.85	55.37
AT3G26660.1	Thale cress	mitochondrion	46.15	54.55
CDY48982	Canola	mitochondrion	46.15	54.55
CDY13647	Canola	cytosol, mitochondrion, nucleus, plastid	46.15	54.55
CDX82498	Canola	cytosol, nucleus, plastid	46.15	54.55
AT3G26620.1	Thale cress	mitochondrion	46.15	54.55
CDX75748	Canola	cytosol, mitochondrion, nucleus	45.45	54.17
VIT_16s0100g00440.t01	Wine grape	mitochondrion	52.45	49.02
Solyc06g064540.1.1	Tomato	mitochondrion, plastid	48.25	46.62
Bra025217.1-P	Field mustard	cytosol	29.37	39.25
GSMUA_Achr11P...	Banana	mitochondrion	41.96	38.22
KRH19529	Soybean	plastid	30.07	35.54
Zm00001d034384_P001	Maize	plastid	39.86	34.76
TraesCS4B01G346500.1	Wheat	cytosol, mitochondrion, nucleus	40.56	34.52
TraesCS4D01G341500.1	Wheat	cytosol, mitochondrion, nucleus	41.26	34.1
HORVU5Hr1G075950.1	Barley	cytosol, nucleus	20.28	33.33
TraesCS5A01G515300.1	Wheat	cytosol	40.56	32.4
EER93325	Sorghum	plastid	40.56	32.22
HORVU4Hr1G084750.2	Barley	cytosol, nucleus	39.16	31.64
TraesCS5A01G284000.1	Wheat	nucleus	40.56	30.85
TraesCS5B01G282700.1	Wheat	nucleus	40.56	30.53
TraesCS5D01G291300.1	Wheat	nucleus	39.86	30.16
Os08t0517100-01	Rice	cytosol, nucleus, plastid	18.88	28.42
KRG97704	Soybean	mitochondrion	34.97	27.93
OQU80868	Sorghum	peroxisome	38.46	27.36
Zm00001d031544_P001	Maize	plastid	38.46	26.7
KRH31169	Soybean	mitochondrion	34.97	26.45
TraesCS1D01G110300.1	Wheat	cytosol, mitochondrion, nucleus	38.46	26.07
KRH14922	Soybean	mitochondrion	32.87	25.82
KRH73279	Soybean	mitochondrion	33.57	25.53
KRH67347	Soybean	plastid	37.06	24.88
KRG95644	Soybean	nucleus	35.66	23.94
KRH76281	Soybean	cytosol, nucleus, plastid	31.47	22.73
KRH73061	Soybean	mitochondrion, nucleus	33.57	21.82
Bra032938.1-P	Field mustard	nucleus	44.06	21.43
KRH65255	Soybean	cytosol, nucleus, plastid	31.47	21.23
KRG95645	Soybean	mitochondrion, nucleus	30.77	21.15
KRH32155	Soybean	plastid	31.47	21.13
KRH67348	Soybean	nucleus	30.77	20.75
KRH15078	Soybean	plastid	32.87	20.35
KRG94981	Soybean	nucleus	33.57	20.08
KRH19530	Soybean	mitochondrion, nucleus	32.17	19.41
KRH71749	Soybean	cytosol, mitochondrion, nucleus	32.17	19.33
KRH32932	Soybean	cytosol, mitochondrion, nucleus	32.17	19.25
KRH32157	Soybean	mitochondrion, nucleus	32.17	19.25
KRH00577	Soybean	plastid	31.47	19.23
KRH40590	Soybean	plastid	30.77	18.97
KRH65254	Soybean	plastid	32.17	18.33
KRH76282	Soybean	plastid	30.77	17.81

Protein Annotations

EMBL:ACUP02008500	EnsemblPlants:KRH14351	EnsemblPlantsGene:GLYMA_14G021100	EntrezGene:100790640	InterPro:IPR004883	InterPro:LOB
PANTHER:PTHR31301	PANTHER:PTHR31301:SF13	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH14351	ProteinID:KRH14351.1
UniParc:UPI00023D41C3	UniProt:K7M4H2	MapMan:15.5.24	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:1485966..1486549

Molecular Weight (calculated)

16202.1 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.445

Length

143 amino acids

Sequence
(BLAST)

001: MSGRCAACKN QRRRCPSDCI FSPYFPANDP ERFARVHRIY GGSNVGKMLQ QIPSYLREQA ANSLYFEAQC RIQDPVYGCA GIISKLYEQI NSTEIALAHV
101: QTQIACQKLQ VPQAKAESNF NVFPAQNSST AEFQWESQVP WFN

Best Arabidopsis Sequence Match ( AT3G26660.1 )
(BLAST)

001: MNPKRCAACK YLRRRCPKDC VFSPYFPPND PQKFACVHRI YGAGNVSKML QQLPDQTRAE AVESLCFEAK CRVDDPVYGC VGIIHLLKTQ IQKTQNELAK
101: TQAEIAVAQT KLSQTQNSDF M

Arabidopsis Description

LBD24LOB domain-containing protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P59468]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.