CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73279	Soybean	mitochondrion	92.86	89.89
KRG97704	Soybean	mitochondrion	82.97	84.36
KRH31169	Soybean	mitochondrion	83.52	80.42
VIT_13s0067g01450.t01	Wine grape	plastid	67.58	71.93
Solyc03g095940.1.1	Tomato	plastid	56.04	60.0
AT3G11090.1	Thale cress	mitochondrion	53.85	59.39
PGSC0003DMT400071281	Potato	plastid	56.04	57.63
CDY00994	Canola	plastid	53.3	56.73
Bra034867.1-P	Field mustard	plastid	53.3	56.4
CDY08551	Canola	plastid	53.3	56.4
KRH19529	Soybean	plastid	29.12	43.8
KRH73761	Soybean	cytosol, nucleus, plastid	15.93	40.28
KRH14351	Soybean	mitochondrion	25.82	32.87
KRH59547	Soybean	mitochondrion, nucleus, plastid	25.27	32.17
KRH76281	Soybean	cytosol, nucleus, plastid	31.87	29.29
KRH67347	Soybean	plastid	33.52	28.64
KRG95644	Soybean	nucleus	32.97	28.17
KRH65255	Soybean	cytosol, nucleus, plastid	32.42	27.83
KRH32155	Soybean	plastid	32.42	27.7
KRH40590	Soybean	plastid	35.16	27.59
KRG95645	Soybean	mitochondrion, nucleus	30.77	26.92
KRH67348	Soybean	nucleus	31.32	26.89
KRH00577	Soybean	plastid	34.07	26.5
KRH32932	Soybean	cytosol, mitochondrion, nucleus	34.62	26.36
KRG94981	Soybean	nucleus	34.62	26.36
KRH19530	Soybean	mitochondrion, nucleus	34.07	26.16
KRH76282	Soybean	plastid	35.16	25.91
KRH65254	Soybean	plastid	35.71	25.9
KRH71749	Soybean	cytosol, mitochondrion, nucleus	32.97	25.21
KRH32157	Soybean	mitochondrion, nucleus	32.97	25.1
KRH73061	Soybean	mitochondrion, nucleus	29.12	24.09
KRH15078	Soybean	plastid	28.57	22.51

Protein Annotations

EMBL:ACUP02008543	EnsemblPlants:KRH14922	EnsemblPlantsGene:GLYMA_14G057600	EntrezGene:100777635	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF24	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH14922
ProteinID:KRH14922.1	SEG:seg	UniParc:UPI0000E64A88	UniProt:I1M7R7	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr14:+:4604289..4605563

Molecular Weight (calculated)

20364.1 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.241

Length

182 amino acids

Sequence
(BLAST)

001: MKGYEPRSSS SCAACKFLKR RCIPNCIFAP YFRSDECKKF AKVHKVFGAS NVSKILVEVP EEQREDTVNS LAYEAEARLR DPVYGCIGAI ALLQRKMVEL
101: QHDLAIAKDR LARYTAAATT ATATTTTSDA LINGHVSLPP FPDFFTCADN FNNDNFCHTS SSQSSFTRHE TVDDFIQIPY IF

Best Arabidopsis Sequence Match ( AT3G11090.1 )
(BLAST)

001: MRGHEPRSSS SCAACKLLKR RCTPTCIFAP YFRSSDLITF AKVHKVFGAS NVSKLLGEVP EEQRQETVNS LAYEAEVRLK DPVYGCIGAI ASLQKKMLEL
101: QHDLAVARTR LLAHSGVNNS QVSPLDDSPE LAAFLDLVPY SDLMLLDGST NLDAYLYDLG QPPFV

Arabidopsis Description

LBD21LBD21 [Source:UniProtKB/TrEMBL;Acc:A0A178V6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.