CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32157	Soybean	mitochondrion, nucleus	92.41	91.63
KRG95645	Soybean	mitochondrion, nucleus	67.51	76.92
KRH67348	Soybean	nucleus	67.51	75.47
VIT_07s0005g03020.t01	Wine grape	mitochondrion, nucleus	66.67	68.1
GSMUA_Achr4P25190_001	Banana	mitochondrion	52.74	58.41
PGSC0003DMT400025142	Potato	nucleus	59.92	57.96
KRH19529	Soybean	plastid	29.54	57.85
Solyc09g066270.2.1	Tomato	nucleus	59.49	57.79
GSMUA_AchrUn_...	Banana	mitochondrion	56.54	57.76
GSMUA_Achr1P06580_001	Banana	mitochondrion	47.68	54.07
GSMUA_Achr11P...	Banana	mitochondrion	46.41	52.13
GSMUA_Achr10P...	Banana	mitochondrion	47.26	51.14
GSMUA_Achr1P01360_001	Banana	mitochondrion, nucleus, plastid	45.57	50.47
GSMUA_AchrUn_...	Banana	mitochondrion	47.26	49.56
GSMUA_Achr8P14330_001	Banana	mitochondrion	48.1	48.72
TraesCS4D01G001700.1	Wheat	mitochondrion	44.3	48.39
KRG95644	Soybean	nucleus	42.19	46.95
KRH67347	Soybean	plastid	41.77	46.48
Zm00001d027679_P001	Maize	cytosol, nucleus	47.26	45.9
EER92849	Sorghum	mitochondrion	47.26	45.71
TraesCS4A01G312500.1	Wheat	mitochondrion	42.19	45.66
HORVU4Hr1G000880.4	Barley	cytosol, nucleus, plastid	43.04	45.33
Os03t0149100-01	Rice	mitochondrion	48.52	44.4
KRH32155	Soybean	plastid	39.24	43.66
Zm00001d048401_P001	Maize	nucleus	43.04	43.59
TraesCSU01G132900.1	Wheat	nucleus	43.04	43.4
TraesCS4B01G001200.1	Wheat	nucleus	43.04	42.68
TraesCS6B01G072200.1	Wheat	nucleus	42.19	42.19
TraesCS6A01G053700.1	Wheat	nucleus	40.51	40.51
KRH76281	Soybean	cytosol, nucleus, plastid	33.33	39.9
KRH73061	Soybean	mitochondrion, nucleus	36.29	39.09
KRH65254	Soybean	plastid	41.35	39.04
KRH73761	Soybean	cytosol, nucleus, plastid	11.81	38.89
KRH40590	Soybean	plastid	37.97	38.79
HORVU4Hr1G080160.1	Barley	plastid	45.99	38.38
KRH65255	Soybean	cytosol, nucleus, plastid	34.18	38.21
TraesCS4D01G312800.1	Wheat	plastid	45.99	38.11
KRG94981	Soybean	nucleus	38.4	38.08
KRH76282	Soybean	plastid	39.66	38.06
TraesCS4B01G316200.1	Wheat	nucleus, plastid	45.99	37.85
TraesCS4A01G415400.1	Wheat	nucleus	45.57	37.37
KRH71749	Soybean	cytosol, mitochondrion, nucleus	37.13	36.97
KRH00577	Soybean	plastid	36.29	36.75
KRH32932	Soybean	cytosol, mitochondrion, nucleus	36.71	36.4
KRH15078	Soybean	plastid	34.6	35.5
KRH14922	Soybean	mitochondrion	26.16	34.07
KRH73279	Soybean	mitochondrion	26.16	32.98
KRG97704	Soybean	mitochondrion	24.89	32.96
KRH59547	Soybean	mitochondrion, nucleus, plastid	19.83	32.87
KRH14351	Soybean	mitochondrion	19.41	32.17
KRH31169	Soybean	mitochondrion	25.32	31.75

Protein Annotations

EMBL:ACUP02008183	EnsemblPlants:KRH19530	EnsemblPlantsGene:GLYMA_13G121400	EntrezGene:100805623	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31529	PANTHER:PTHR31529:SF2	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH19530
ProteinID:KRH19530.1	SEG:seg	UniParc:UPI000233C8E7	UniProt:I1LYI0	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr13:-:23429853..23431127

Molecular Weight (calculated)

26071.3 Da

IEP (calculated)

6.010

GRAVY (calculated)

-0.378

Length

237 amino acids

Sequence
(BLAST)

001: MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ
101: LAYLKEQAAQ SCLDGSINEN PSEKLFEKSS SALPQDLQSW FNQVGNSNLG PEFLPNMCTN LSTQHYGNNA LMEDLNPIGI NYETSGAMEG NNSSSFDDSS
201: NNYSMSYDMQ TNRRTWGFHE VEDLHSVAFG YGTRSHS

Best Arabidopsis Sequence Match ( AT3G58190.1 )
(BLAST)

001: MTSSSSSSGS PCGACKFLRR KCAKGCVFAP YFCHEQGASH FAAIHKVFGA SNASKLLSHL PISDRCEAAI TISYEAQARL QDPIYGCVSH IFALQQQVVN
101: LQAELEILKQ QAAQSMIFAD SPTSENPNSY YGDTTKAPYH HDHQNIYHHH DQTHLVYQTG SSGTVQHGDA TESSYHNETS SGMGEFSIYS DLEQHLNTFN
201: QDHLKELQSA NFGYISFS

Arabidopsis Description

LBD29LBD29 [Source:UniProtKB/TrEMBL;Acc:A0A178VM67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.