CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31169	Soybean	mitochondrion	97.21	92.06
KRH14922	Soybean	mitochondrion	84.36	82.97
KRH73279	Soybean	mitochondrion	82.68	78.72
VIT_13s0067g01450.t01	Wine grape	plastid	67.6	70.76
AT3G11090.1	Thale cress	mitochondrion	55.31	60.0
Solyc03g095940.1.1	Tomato	plastid	55.87	58.82
CDY00994	Canola	plastid	54.75	57.31
PGSC0003DMT400071281	Potato	plastid	56.42	57.06
Bra034867.1-P	Field mustard	plastid	54.75	56.98
CDY08551	Canola	plastid	54.75	56.98
KRH19529	Soybean	plastid	29.61	43.8
KRH73761	Soybean	cytosol, nucleus, plastid	16.2	40.28
KRH14351	Soybean	mitochondrion	27.93	34.97
KRH59547	Soybean	mitochondrion, nucleus, plastid	27.37	34.27
KRH76281	Soybean	cytosol, nucleus, plastid	32.4	29.29
KRG95644	Soybean	nucleus	33.52	28.17
KRH67347	Soybean	plastid	33.52	28.17
KRH65255	Soybean	cytosol, nucleus, plastid	32.96	27.83
KRH40590	Soybean	plastid	35.75	27.59
KRH32155	Soybean	plastid	32.4	27.23
KRH32932	Soybean	cytosol, mitochondrion, nucleus	35.75	26.78
KRG94981	Soybean	nucleus	35.2	26.36
KRH00577	Soybean	plastid	34.08	26.07
KRH67348	Soybean	nucleus	30.73	25.94
KRH71749	Soybean	cytosol, mitochondrion, nucleus	34.08	25.63
KRH65254	Soybean	plastid	35.75	25.5
KRG95645	Soybean	mitochondrion, nucleus	29.61	25.48
KRH19530	Soybean	mitochondrion, nucleus	32.96	24.89
KRH76282	Soybean	plastid	34.08	24.7
KRH32157	Soybean	mitochondrion, nucleus	32.4	24.27
KRH73061	Soybean	mitochondrion, nucleus	29.05	23.64
KRH15078	Soybean	plastid	29.05	22.51

Protein Annotations

EMBL:ACUP02010809	EnsemblPlants:KRG97704	EnsemblPlantsGene:GLYMA_18G025600	EntrezGene:100791250	InterPro:IPR004883	InterPro:LOB
ncoils:Coil	PANTHER:PTHR31301	PANTHER:PTHR31301:SF24	PFAM:PF03195	PFscan:PS50891	ProteinID:KRG97704
ProteinID:KRG97704.1	SEG:seg	UniParc:UPI000233F40F	UniProt:I1MZ09	MapMan:15.5.24	:

Description

hypothetical protein

Coordinates

chr18:+:1893087..1894231

Molecular Weight (calculated)

19898.8 Da

IEP (calculated)

7.381

GRAVY (calculated)

-0.158

Length

179 amino acids

Sequence
(BLAST)

001: MKGYEPRSSS SCAACKLLKR RCIPNCIFAP YFRSDECKKF AKVHKVFGAS NVSKILIEVP EEQREDTVNS LAYEAEARLR DPVYGCIGAI ALLQRKMVEL
101: QHDLAIAKDR LARCHAAAAA ATTTIPSPDI LHANVSLPPF PDFCTSSSDF NDIFCHSSSS QLLGRHETVD DFNQIPYIF

Best Arabidopsis Sequence Match ( AT3G11090.1 )
(BLAST)

001: MRGHEPRSSS SCAACKLLKR RCTPTCIFAP YFRSSDLITF AKVHKVFGAS NVSKLLGEVP EEQRQETVNS LAYEAEVRLK DPVYGCIGAI ASLQKKMLEL
101: QHDLAVARTR LLAHSGVNNS QVSPLDDSPE LAAFLDLVPY SDLMLLDGST NLDAYLYDLG QPPFV

Arabidopsis Description

LBD21LBD21 [Source:UniProtKB/TrEMBL;Acc:A0A178V6L2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.