Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65255 | Soybean | cytosol, nucleus, plastid | 87.37 | 81.6 |
| VIT_15s0048g00840.t01 | Wine grape | cytosol, nucleus, plastid | 60.61 | 61.86 |
| Bra040312.1-P | Field mustard | cytosol, nucleus, plastid | 48.99 | 57.74 |
| HORVU0Hr1G020290.1 | Barley | cytosol, plastid | 36.36 | 57.6 |
| PGSC0003DMT400033221 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 38.38 | 57.14 |
| KRH19529 | Soybean | plastid | 34.85 | 57.02 |
| Solyc01g091400.2.1 | Tomato | plastid | 47.47 | 56.29 |
| AT2G45410.1 | Thale cress | cytosol, nucleus, plastid | 54.04 | 56.02 |
| CDY57108 | Canola | mitochondrion | 49.49 | 55.06 |
| CDY37038 | Canola | mitochondrion | 48.99 | 54.49 |
| CDY68561 | Canola | cytosol, nucleus, plastid | 49.49 | 52.13 |
| Bra004908.1-P | Field mustard | cytosol, nucleus, plastid | 48.48 | 51.06 |
| CDX74738 | Canola | cytosol, nucleus, plastid | 48.48 | 51.06 |
| AT4G00210.1 | Thale cress | nucleus | 53.54 | 48.18 |
| CDY07237 | Canola | nucleus | 45.45 | 46.63 |
| Bra037322.1-P | Field mustard | nucleus | 47.98 | 42.79 |
| CDY67746 | Canola | nucleus | 47.98 | 42.79 |
| KRH40590 | Soybean | plastid | 50.0 | 42.67 |
| KRH76282 | Soybean | plastid | 53.03 | 42.51 |
| KRH00577 | Soybean | plastid | 50.0 | 42.31 |
| KRH65254 | Soybean | plastid | 53.54 | 42.23 |
| KRG95644 | Soybean | nucleus | 41.92 | 38.97 |
| KRH32155 | Soybean | plastid | 41.41 | 38.5 |
| KRH67347 | Soybean | plastid | 40.91 | 38.03 |
| HORVU7Hr1G046690.1 | Barley | cytosol, nucleus, plastid | 42.93 | 37.28 |
| TraesCS7A01G228900.1 | Wheat | cytosol, nucleus, plastid | 42.93 | 37.12 |
| KRH73761 | Soybean | cytosol, nucleus, plastid | 13.13 | 36.11 |
| KRH67348 | Soybean | nucleus | 38.38 | 35.85 |
| KRG95645 | Soybean | mitochondrion, nucleus | 37.37 | 35.58 |
| TraesCS7D01G229900.1 | Wheat | cytosol, nucleus, plastid | 40.91 | 35.37 |
| TraesCS7B01G195100.1 | Wheat | cytosol, nucleus, plastid | 40.4 | 34.93 |
| KRH71749 | Soybean | cytosol, mitochondrion, nucleus | 40.4 | 33.61 |
| KRH32157 | Soybean | mitochondrion, nucleus | 40.4 | 33.47 |
| KRH19530 | Soybean | mitochondrion, nucleus | 39.9 | 33.33 |
| KRG94981 | Soybean | nucleus | 39.9 | 33.05 |
| KRH32932 | Soybean | cytosol, mitochondrion, nucleus | 39.39 | 32.64 |
| KRG97704 | Soybean | mitochondrion | 29.29 | 32.4 |
| KRH73279 | Soybean | mitochondrion | 30.3 | 31.91 |
| KRH14922 | Soybean | mitochondrion | 29.29 | 31.87 |
| KRH31169 | Soybean | mitochondrion | 30.3 | 31.75 |
| KRH14351 | Soybean | mitochondrion | 22.73 | 31.47 |
| KRH59547 | Soybean | mitochondrion, nucleus, plastid | 22.22 | 30.77 |
| KRH73061 | Soybean | mitochondrion, nucleus | 33.84 | 30.45 |
| KRH15078 | Soybean | plastid | 33.84 | 29.0 |
Protein Annotations
| EMBL:ACUP02000595 | EnsemblPlants:KRH76281 | EnsemblPlantsGene:GLYMA_01G143800 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF7 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH76281 | ProteinID:KRH76281.1 | SEG:seg |
| UniParc:UPI0002969612 | UniProt:K7K3V1 | MapMan:15.5.24 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:47752470..47757620
Molecular Weight (calculated)
21560.9 Da
IEP (calculated)
8.305
GRAVY (calculated)
-0.185
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGGNKIGG SDRGGPCGAC KFLRRKCVKG CIFAPYFDSD QGTAHFAAVH KVFGASNASK LLMRIPAHKR LDAVVTLCYE ALARARDPVY GCVGHLFALQ
101: QQVMNLQAEL TYVQARLATM QRLPMQVAPL PHPQSSSPPP TFHSSDHLAS NADLQSAPMM HFDPLQPHSA SLELSSVVFN QSDQQLEVGN SKFWHGNL
101: QQVMNLQAEL TYVQARLATM QRLPMQVAPL PHPQSSSPPP TFHSSDHLAS NADLQSAPMM HFDPLQPHSA SLELSSVVFN QSDQQLEVGN SKFWHGNL
001: MMTGNLNGGG RGGEGPCGAC KFLRRKCVKG CVFAPYFDAE QGTARFAAVH KVFGASNASK MLLRLPLHKR LDAVVTLCYE AMARIRDPVY GSVGHLFSLQ
101: HQVMNLQAEL AHVQARLSTI QRFPLQSPQQ MQPPSFDPAH NNEYAMEPSN LDSVWGEEHL LQDGTGDGDF QELASQFVSR YLPAVKLPAC T
101: HQVMNLQAEL AHVQARLSTI QRFPLQSPQQ MQPPSFDPAH NNEYAMEPSN LDSVWGEEHL LQDGTGDGDF QELASQFVSR YLPAVKLPAC T
Arabidopsis Description
LBD19LBD19 [Source:UniProtKB/TrEMBL;Acc:A0A178VSY1]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.