Factsheet for HORVU7Hr1G046690.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G020290.1	Barley	cytosol, plastid	50.44	92.0
TraesCS7A01G228900.1	Wheat	cytosol, nucleus, plastid	81.14	80.79
TraesCS7D01G229900.1	Wheat	cytosol, nucleus, plastid	79.39	79.04
TraesCS7B01G195100.1	Wheat	cytosol, nucleus, plastid	78.95	78.6
VIT_15s0048g00840.t01	Wine grape	cytosol, nucleus, plastid	41.23	48.45
Bra040312.1-P	Field mustard	cytosol, nucleus, plastid	32.89	44.64
Solyc01g091400.2.1	Tomato	plastid	32.46	44.31
AT2G45410.1	Thale cress	cytosol, nucleus, plastid	35.96	42.93
KRH76281	Soybean	cytosol, nucleus, plastid	37.28	42.93
CDY68561	Canola	cytosol, nucleus, plastid	35.09	42.55
HORVU4Hr1G063160.1	Barley	plastid	47.37	42.19
CDY37038	Canola	mitochondrion	32.89	42.13
CDY57108	Canola	mitochondrion	32.89	42.13
Bra004908.1-P	Field mustard	cytosol, nucleus, plastid	34.65	42.02
CDX74738	Canola	cytosol, nucleus, plastid	34.65	42.02
AT4G00210.1	Thale cress	nucleus	39.91	41.36
KRH65255	Soybean	cytosol, nucleus, plastid	37.72	40.57
PGSC0003DMT400033221	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	23.25	39.85
CDY07237	Canola	nucleus	32.02	37.82
HORVU4Hr1G080150.1	Barley	plastid	29.82	36.96
CDY67746	Canola	nucleus	35.96	36.94
Bra037322.1-P	Field mustard	nucleus	35.96	36.94
HORVU0Hr1G017670.2	Barley	plastid	31.58	34.29
HORVU4Hr1G000880.4	Barley	cytosol, nucleus, plastid	32.02	32.44
HORVU5Hr1G075950.1	Barley	cytosol, nucleus	12.28	32.18
HORVU4Hr1G080160.1	Barley	plastid	37.72	30.28
HORVU4Hr1G084750.2	Barley	cytosol, nucleus	21.49	27.68
HORVU3Hr1G075370.2	Barley	nucleus	28.07	27.47

Protein Annotations

EnsemblPlants:HORVU7Hr1G046690.1	EnsemblPlantsGene:HORVU7Hr1G046690	InterPro:IPR004883	InterPro:LOB	ncoils:Coil	PANTHER:PTHR31529
PANTHER:PTHR31529:SF3	PFAM:PF03195	PFscan:PS50891	SEG:seg	UniParc:UPI000B485E5A	UniProt:A0A287WCP7
MapMan:15.5.24	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:153154346..153156168

Molecular Weight (calculated)

24770.1 Da

IEP (calculated)

6.497

GRAVY (calculated)

-0.426

Length

228 amino acids

Sequence
(BLAST)

001: MSGSSTSVGV GVGAMLSGSS GGPCGACKFL RRKCTDDCIF APYFDSDQGV EHFTAVHKVF GASNVSKLLN QTPPQKRLDA AITICYEAKA RLRDPAYGCV
101: ADIFALQQQV ENLQAEVGFL HARLRTLQQT SPPPFPSPPY MPMTTEFSIS EMASLSNVPN TIDISSLFDP SMQWAFQQQQ EHHQQRHQQP CGQTEEGSGG
201: IGNTNSNSGD LQALARELLD RRSTRSTP

Best Arabidopsis Sequence Match ( AT2G45420.1 )
(BLAST)

001: MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR

Arabidopsis Description

LBD18LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.