Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07237 | Canola | nucleus | 63.64 | 72.54 |
| CDY67746 | Canola | nucleus | 72.73 | 72.07 |
| Bra037322.1-P | Field mustard | nucleus | 72.73 | 72.07 |
| HORVU0Hr1G020290.1 | Barley | cytosol, plastid | 32.27 | 56.8 |
| VIT_15s0048g00840.t01 | Wine grape | cytosol, nucleus, plastid | 49.55 | 56.19 |
| KRH76281 | Soybean | cytosol, nucleus, plastid | 48.18 | 53.54 |
| Solyc01g091400.2.1 | Tomato | plastid | 39.55 | 52.1 |
| PGSC0003DMT400033221 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 31.36 | 51.88 |
| KRH65255 | Soybean | cytosol, nucleus, plastid | 49.09 | 50.94 |
| AT2G45410.1 | Thale cress | cytosol, nucleus, plastid | 43.18 | 49.74 |
| AT4G00220.1 | Thale cress | plastid | 45.0 | 43.42 |
| AT3G26660.1 | Thale cress | mitochondrion | 23.18 | 42.15 |
| AT3G26620.1 | Thale cress | mitochondrion | 22.27 | 40.5 |
| HORVU7Hr1G046690.1 | Barley | cytosol, nucleus, plastid | 41.36 | 39.91 |
| TraesCS7A01G228900.1 | Wheat | cytosol, nucleus, plastid | 41.36 | 39.74 |
| TraesCS7D01G229900.1 | Wheat | cytosol, nucleus, plastid | 41.36 | 39.74 |
| TraesCS7B01G195100.1 | Wheat | cytosol, nucleus, plastid | 40.0 | 38.43 |
| AT5G06080.1 | Thale cress | mitochondrion, nucleus | 30.91 | 38.42 |
| AT2G31310.1 | Thale cress | nucleus | 32.27 | 37.77 |
| AT3G58190.1 | Thale cress | plastid | 37.27 | 37.61 |
| AT2G45420.1 | Thale cress | plastid | 44.55 | 37.4 |
| AT3G11090.1 | Thale cress | mitochondrion | 26.82 | 35.76 |
| AT2G42430.1 | Thale cress | plastid | 38.18 | 34.29 |
| AT2G42440.1 | Thale cress | mitochondrion, nucleus | 35.0 | 31.56 |
| AT3G03760.1 | Thale cress | nucleus, plastid | 37.73 | 30.4 |
Protein Annotations
| MapMan:15.5.24 | EntrezGene:828114 | UniProt:A0A178UT63 | ProteinID:AAC19294.1 | EMBL:AB473855 | ProteinID:AEE81838.1 |
| ArrayExpress:AT4G00210 | EnsemblPlantsGene:AT4G00210 | RefSeq:AT4G00210 | TAIR:AT4G00210 | RefSeq:AT4G00210-TAIR-G | EnsemblPlants:AT4G00210.1 |
| TAIR:AT4G00210.1 | ProteinID:CAB80779.1 | GO:GO:0008150 | InterPro:IPR004883 | Symbol:LBD31 | InterPro:LOB |
| RefSeq:NP_191932.4 | UniProt:O81322 | ProteinID:OAO96805.1 | PFAM:PF03195 | PFscan:PS50891 | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF7 | UniParc:UPI00018E1D01 | SEG:seg | : | : | : |
Description
LBD31LOB domain-containing protein 31 [Source:UniProtKB/Swiss-Prot;Acc:O81322]
Coordinates
chr4:-:85471..87071
Molecular Weight (calculated)
23808.1 Da
IEP (calculated)
5.602
GRAVY (calculated)
-0.195
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSTTGCGG PCGACKFLRR KCVADCVFAP YFDSVEGTSH FTAVHKVFGA SNASKLLMMI PASRRLDAVV TLTYEALARL RDPVYGCVGH IFALQHQVMN
101: LQAELAYVQT QLSTLQGLPP PNSQNNSRTE AASSSNVPLI SSVDSKDNMS SSSSHIPCMS QQQEQEQPKE AIEVPTESVD LSTFFGLENP VDEDGDLNAL
201: AREFFTKYLT GGKYRPSSLI
101: LQAELAYVQT QLSTLQGLPP PNSQNNSRTE AASSSNVPLI SSVDSKDNMS SSSSHIPCMS QQQEQEQPKE AIEVPTESVD LSTFFGLENP VDEDGDLNAL
201: AREFFTKYLT GGKYRPSSLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.