Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10793 | Canola | nucleus | 78.72 | 82.22 |
| CDY24760 | Canola | nucleus | 78.19 | 81.67 |
| Bra018260.1-P | Field mustard | nucleus | 78.72 | 76.68 |
| AT3G58190.1 | Thale cress | plastid | 47.87 | 41.28 |
| AT5G06080.1 | Thale cress | mitochondrion, nucleus | 36.7 | 38.98 |
| AT3G26620.1 | Thale cress | mitochondrion | 23.94 | 37.19 |
| AT3G26660.1 | Thale cress | mitochondrion | 23.94 | 37.19 |
| AT2G45410.1 | Thale cress | cytosol, nucleus, plastid | 37.77 | 37.17 |
| AT2G42440.1 | Thale cress | mitochondrion, nucleus | 47.34 | 36.48 |
| AT4G00220.1 | Thale cress | plastid | 42.02 | 34.65 |
| AT4G00210.1 | Thale cress | nucleus | 37.77 | 32.27 |
| AT2G42430.1 | Thale cress | plastid | 40.43 | 31.02 |
| AT2G45420.1 | Thale cress | plastid | 41.49 | 29.77 |
| AT3G11090.1 | Thale cress | mitochondrion | 25.53 | 29.09 |
| AT3G03760.1 | Thale cress | nucleus, plastid | 39.36 | 27.11 |
Protein Annotations
| MapMan:15.5.24 | EntrezGene:817689 | UniProt:A0A178VXJ0 | ProteinID:AAD20676.1 | EMBL:AB473850 | ProteinID:AEC08526.1 |
| ArrayExpress:AT2G31310 | EnsemblPlantsGene:AT2G31310 | RefSeq:AT2G31310 | TAIR:AT2G31310 | RefSeq:AT2G31310-TAIR-G | EnsemblPlants:AT2G31310.1 |
| TAIR:AT2G31310.1 | Unigene:At.52992 | ncoils:Coil | GO:GO:0008150 | InterPro:IPR004883 | Symbol:LBD14 |
| InterPro:LOB | RefSeq:NP_180689.1 | ProteinID:OAP10536.1 | PFAM:PF03195 | PFscan:PS50891 | PANTHER:PTHR31529 |
| PANTHER:PTHR31529:SF12 | UniProt:Q9SJW5 | UniParc:UPI000009E20B | SEG:seg | : | : |
Description
LBD14LOB domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW5]
Coordinates
chr2:+:13352917..13353672
Molecular Weight (calculated)
21303.9 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.520
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLGSPCGG CKFLRRKCVE GCVFAPYFCY EEGSSNFAAI HKVFGASNFS KLISHLPDHD RCDAVRTISY EAHSRLHDPI YGCVSQIFSL QQQVVSLQAQ
101: VVLLREEASR RFPQDDPGCN MKQQEKVLAQ QMPQDLHNWF HQGILDSDFD PMSGTTRDNE RSMDHNESPC SSNESLNYYQ EVNFPWSV
101: VVLLREEASR RFPQDDPGCN MKQQEKVLAQ QMPQDLHNWF HQGILDSDFD PMSGTTRDNE RSMDHNESPC SSNESLNYYQ EVNFPWSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.