CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76282	Soybean	plastid	89.24	90.69
VIT_15s0048g00830.t01	Wine grape	nucleus	66.14	66.14
GSMUA_Achr5P11330_001	Banana	plastid	61.35	63.9
KRH40590	Soybean	plastid	58.96	63.79
KRH00577	Soybean	plastid	58.57	62.82
GSMUA_Achr2P11240_001	Banana	plastid	57.77	61.44
GSMUA_Achr1P02520_001	Banana	cytosol, nucleus, plastid	58.96	61.16
KRH19529	Soybean	plastid	29.08	60.33
Zm00001d028413_P001	Maize	plastid	61.75	59.62
CDY18932	Canola	plastid	58.57	58.57
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	59.76	58.37
Bra004910.1-P	Field mustard	plastid	58.57	58.1
Bra040311.1-P	Field mustard	nucleus	59.76	57.92
HORVU4Hr1G063160.1	Barley	plastid	58.96	57.81
Zm00001d047921_P001	Maize	plastid	60.96	57.74
CDY68635	Canola	nucleus	59.36	57.53
CDY57109	Canola	plastid	59.36	57.31
TraesCS4D01G225200.1	Wheat	nucleus	59.36	57.31
EER92557	Sorghum	nucleus	62.55	56.88
AT2G45420.1	Thale cress	plastid	58.96	56.49
TraesCS4B01G224600.1	Wheat	plastid	58.96	56.49
TraesCS4A01G067300.1	Wheat	nucleus	59.76	56.39
Os03t0246900-00	Rice	nucleus	61.75	56.36
KRH76281	Soybean	cytosol, nucleus, plastid	42.23	53.54
Zm00001d030364_P001	Maize	plastid	52.19	53.47
Os10t0162600-00	Rice	nucleus	56.97	53.16
KXG38649	Sorghum	plastid	54.58	52.69
KRH65255	Soybean	cytosol, nucleus, plastid	44.22	52.36
KRG95644	Soybean	nucleus	37.05	43.66
KRH32155	Soybean	plastid	36.65	43.19
KRG95645	Soybean	mitochondrion, nucleus	35.46	42.79
KRH67347	Soybean	plastid	36.26	42.72
KRH67348	Soybean	nucleus	35.46	41.98
KRH19530	Soybean	mitochondrion, nucleus	39.04	41.35
KRH32157	Soybean	mitochondrion, nucleus	39.04	41.0
GSMUA_Achr4P28810_001	Banana	nucleus	45.02	38.31
KRG94981	Soybean	nucleus	35.86	37.66
KRH73761	Soybean	cytosol, nucleus, plastid	10.76	37.5
KRH32932	Soybean	cytosol, mitochondrion, nucleus	34.66	36.4
KRH71749	Soybean	cytosol, mitochondrion, nucleus	34.26	36.13
KRG97704	Soybean	mitochondrion	25.5	35.75
KRH14922	Soybean	mitochondrion	25.9	35.71
KRH73061	Soybean	mitochondrion, nucleus	31.08	35.45
KRH73279	Soybean	mitochondrion	26.29	35.11
KRH31169	Soybean	mitochondrion	25.9	34.39
KRH59547	Soybean	mitochondrion, nucleus, plastid	19.52	34.27
KRH15078	Soybean	plastid	30.28	32.9
KRH14351	Soybean	mitochondrion	18.33	32.17

Protein Annotations

EMBL:ACUP02001318	EnsemblPlants:KRH65254	EnsemblPlantsGene:GLYMA_03G023000	EntrezGene:100779541	InterPro:IPR004883	InterPro:LOB
PANTHER:PTHR31529	PANTHER:PTHR31529:SF3	PFAM:PF03195	PFscan:PS50891	ProteinID:KRH65254	ProteinID:KRH65254.1
SEG:seg	UniParc:UPI00023397B1	UniProt:I1JKK9	MapMan:15.5.24	:	:

Description

hypothetical protein

Coordinates

chr3:-:2423540..2428634

Molecular Weight (calculated)

25967.8 Da

IEP (calculated)

8.005

GRAVY (calculated)

-0.091

Length

251 amino acids

Sequence
(BLAST)

001: MSINSSCSIS GGSSSGGNNN GAGGSGGNNG GGSPCGACKF LRRKCVPGCI FAPYFDSEQG ATHFAAVHKV FGASNVSKLL LNIPVYKRLD AVVTICYEAQ
101: ARLRDPVYGC VAHIFALQQQ VVSLQAELSY LQGHLATLEL PQPPPPPPPP SSPQATTMAP PVISIAELPS TVPATYDLSS LFDPMAQSPS WAVQPRPIES
201: RQYVGSGPSG PSATSASGGD LQALARELLH RHGSAPVVAC SNPSYSHPIS K

Best Arabidopsis Sequence Match ( AT2G45420.1 )
(BLAST)

001: MSGGGNTITA VGGGGGGCGG GGSSGGGGSS GGGGGGPCGA CKFLRRKCVP GCIFAPYFDS EQGSAYFAAV HKVFGASNVS KLLLHIPVHR RSDAVVTICY
101: EAQARIRDPI YGCVAHIFAL QQQVVNLQAE VSYLQAHLAS LELPQPQTRP QPMPQPQPLF FTPPPPLAIT DLPASVSPLP STYDLASIFD QTTSSSAWAT
201: QQRRFIDPRH QYGVSSSSSS VAVGLGGENS HDLQALAHEL LHRQGSPPPA ATDHSPSRTM SR

Arabidopsis Description

LBD18LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.