Factsheet for GSMUA_AchrUn_randomP07730_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06580_001	Banana	mitochondrion	47.79	51.67
GSMUA_Achr1P01360_001	Banana	mitochondrion, nucleus, plastid	48.23	50.93
GSMUA_Achr4P25190_001	Banana	mitochondrion	48.23	50.93
GSMUA_Achr10P...	Banana	mitochondrion	48.67	50.23
KRG95645	Soybean	mitochondrion, nucleus	45.58	49.52
GSMUA_AchrUn_...	Banana	mitochondrion	50.44	49.14
GSMUA_Achr11P...	Banana	mitochondrion	45.58	48.82
VIT_07s0005g03020.t01	Wine grape	mitochondrion, nucleus	50.0	48.71
GSMUA_Achr5P13230_001	Banana	mitochondrion, plastid	41.15	48.19
KRH32157	Soybean	mitochondrion, nucleus	50.88	48.12
KRH67348	Soybean	nucleus	45.13	48.11
KRH19530	Soybean	mitochondrion, nucleus	49.56	47.26
GSMUA_Achr1P01350_001	Banana	nucleus	40.71	45.77
GSMUA_Achr3P27340_001	Banana	mitochondrion, plastid	36.73	45.36
GSMUA_Achr8P14330_001	Banana	mitochondrion	46.46	44.87
PGSC0003DMT400025142	Potato	nucleus	47.35	43.67
Solyc09g066270.2.1	Tomato	nucleus	46.9	43.44
GSMUA_Achr2P11240_001	Banana	plastid	42.04	40.25
GSMUA_Achr5P11330_001	Banana	plastid	39.82	37.34
GSMUA_Achr1P02520_001	Banana	cytosol, nucleus, plastid	39.82	37.19
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	40.71	35.8
GSMUA_Achr11P...	Banana	mitochondrion	21.68	31.21
GSMUA_Achr4P28810_001	Banana	nucleus	35.4	27.12

Protein Annotations

MapMan:15.5.24	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653
GO:GO:0009791	GO:GO:0010311	GO:GO:0042803	GO:GO:0048830	EnsemblPlantsGene:GSMUA_AchrUn_randomG07730_001	EnsemblPlants:GSMUA_AchrUn_randomP07730_001
EnsemblPlants:GSMUA_AchrUn_randomT07730_001	InterPro:IPR004883	InterPro:LOB	UniProt:M0U784	PFAM:PF03195	PFscan:PS50891
PANTHER:PTHR31529	PANTHER:PTHR31529:SF2	UniParc:UPI00029639FC	SEG:seg	:	:

Description

DUF260 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07730_001]

Coordinates

chrchrUn_random:-:32633104..32633900

Molecular Weight (calculated)

24713.3 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.178

Length

226 amino acids

Sequence
(BLAST)

001: MTGFGSPCGA CKFLRRKCVR GCVFAPHFCN EQGAARFAAI HKVFGASNAS KLLMHLPVSD RSEAAVTISY EAQARLQDPI YGCVAHIFAL QRQVVNLQAQ
101: LVSLKAQSAQ AFADGSLSQE DSLNHQLLDQ LQLDREARMR HALVSDSPLS TERTMYHDNG LLDSSSSLLP SPHGVPHSYM GVDDGIFFGT DEDMENALVT
201: QTVGRSSADH NMEDLRSVAF AHLRHV

Best Arabidopsis Sequence Match ( AT3G58190.1 )
(BLAST)

001: MTSSSSSSGS PCGACKFLRR KCAKGCVFAP YFCHEQGASH FAAIHKVFGA SNASKLLSHL PISDRCEAAI TISYEAQARL QDPIYGCVSH IFALQQQVVN
101: LQAELEILKQ QAAQSMIFAD SPTSENPNSY YGDTTKAPYH HDHQNIYHHH DQTHLVYQTG SSGTVQHGDA TESSYHNETS SGMGEFSIYS DLEQHLNTFN
201: QDHLKELQSA NFGYISFS

Arabidopsis Description

LBD29LBD29 [Source:UniProtKB/TrEMBL;Acc:A0A178VM67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.