Factsheet for GSMUA_Achr8P14330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	60.68	67.3
GSMUA_Achr4P25190_001	Banana	mitochondrion	48.72	53.27
GSMUA_AchrUn_...	Banana	mitochondrion	51.71	52.16
KRG95645	Soybean	mitochondrion, nucleus	45.3	50.96
GSMUA_Achr1P01360_001	Banana	mitochondrion, nucleus, plastid	46.15	50.47
VIT_07s0005g03020.t01	Wine grape	mitochondrion, nucleus	50.0	50.43
GSMUA_Achr1P06580_001	Banana	mitochondrion	44.87	50.24
KRH67348	Soybean	nucleus	45.3	50.0
GSMUA_Achr10P...	Banana	mitochondrion	45.73	48.86
GSMUA_Achr3P27340_001	Banana	mitochondrion, plastid	38.03	48.63
KRH32157	Soybean	mitochondrion, nucleus	49.15	48.12
KRH19530	Soybean	mitochondrion, nucleus	48.72	48.1
GSMUA_AchrUn_...	Banana	mitochondrion	44.87	46.46
GSMUA_Achr1P01350_001	Banana	nucleus	39.74	46.27
Solyc09g066270.2.1	Tomato	nucleus	46.15	44.26
PGSC0003DMT400025142	Potato	nucleus	46.15	44.08
GSMUA_Achr5P13230_001	Banana	mitochondrion, plastid	36.32	44.04
EER92849	Sorghum	mitochondrion	45.73	43.67
Zm00001d027679_P001	Maize	cytosol, nucleus	45.3	43.44
Os03t0149100-01	Rice	mitochondrion	46.58	42.08
Zm00001d048401_P001	Maize	nucleus	41.45	41.45
GSMUA_Achr2P11240_001	Banana	plastid	39.32	38.98
GSMUA_Achr5P11330_001	Banana	plastid	39.74	38.59
GSMUA_Achr1P02520_001	Banana	cytosol, nucleus, plastid	38.46	37.19
HORVU4Hr1G080160.1	Barley	plastid	44.02	36.27
TraesCS4B01G316200.1	Wheat	nucleus, plastid	44.02	35.76
TraesCS4D01G312800.1	Wheat	plastid	43.59	35.66
TraesCS4A01G415400.1	Wheat	nucleus	44.02	35.64
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	37.61	34.24
GSMUA_Achr11P...	Banana	mitochondrion	20.51	30.57
GSMUA_Achr4P28810_001	Banana	nucleus	34.62	27.46

Protein Annotations

EnsemblPlants:GSMUA_Achr8P14330_001	EnsemblPlants:GSMUA_Achr8T14330_001	EnsemblPlantsGene:GSMUA_Achr8G14330_001	InterPro:IPR004883	InterPro:LOB	ncoils:Coil
PANTHER:PTHR31529	PANTHER:PTHR31529:SF2	PFAM:PF03195	PFscan:PS50891	SEG:seg	UniParc:UPI00029507B4
UniProt:M0TQD6	MapMan:15.5.24	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G14330_001]

Coordinates

chr8:+:11042034..11042807

Molecular Weight (calculated)

25482.1 Da

IEP (calculated)

6.497

GRAVY (calculated)

-0.227

Length

234 amino acids

Sequence
(BLAST)

001: MAGLGSPCGA CKFLRRKCVN GCVFAPYFHH QHGAAHFAAI HKVFGASNVA KLLMHLPMAD RPEAAVTISY EAQARLQNPI YGCVAHIFAL QQQVVNLQAQ
101: VASLEAQAAR RRGNGIPVGS IGQLEDMLCN TGPPHRQDLQ GFIDQAGDRK TPPQFASTLS MDVNWYPNSV WSLEESTPPT NFDMADEDFS FEAFSLTSCF
201: DMEDEFWRSA CHGNGDLQPA ASAGAGRSWG RGIH

Best Arabidopsis Sequence Match ( AT2G31310.1 )
(BLAST)

001: MGGLGSPCGG CKFLRRKCVE GCVFAPYFCY EEGSSNFAAI HKVFGASNFS KLISHLPDHD RCDAVRTISY EAHSRLHDPI YGCVSQIFSL QQQVVSLQAQ
101: VVLLREEASR RFPQDDPGCN MKQQEKVLAQ QMPQDLHNWF HQGILDSDFD PMSGTTRDNE RSMDHNESPC SSNESLNYYQ EVNFPWSV

Arabidopsis Description

LBD14LOB domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.